Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_04606
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Entry
SULPSESMR1_04606 CDS
T04974
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spse03400
]
SULPSESMR1_04606 (sbcD)
DNA repair and recombination proteins [BR:
spse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SULPSESMR1_04606 (sbcD)
Archaeal homologous recombinant proteins
SULPSESMR1_04606 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
ATP-grasp_2
NNH6
Motif
Other DBs
NCBI-ProteinID:
ASM75763
UniProt:
A0A221KA96
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All DBs
Position
pSMR1-7:74167..75303
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AA seq
378 aa
AA seq
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MRLLHTADLHLGRQFMGLSLEEDHEVILGQILEALVVERADVLVIAGDVFDRASPPNSSV
RQFNRFLKRVAEETEAAVVMISGNHDSGDRIEAMSVFSTASRVLVRGIADAVEAPLVLRD
AQGEVAFSALPFSYEYAAREVFRDESINAPAEVVAAQIAAARRQVPDGARWVVVAHAFVA
GGAVGETERALTRVGGIETVPSDVFDGADYVALGHLHKPQEVGASHIRYSGAPLAFGFDE
AGNEKSMTVVDLKAEGVEIRIVPFRPIRQVRSLTGAFSDLLEGTPSDDFIQAILTDENPL
IDPMKRLRATYPNACHLTYARQERAAETKALGSGRTAVTPIEMIVDFVKVVRGREPNATE
VAIIAEKLHAVTSGEEQT
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgagactacttcatacggcagatctgcacctggggcggcagttcatggggttgagcctc
gaggaggatcatgaggttatcctgggtcagatccttgaagcgcttgtggtcgaacgagct
gatgttcttgtcatcgcgggggacgtttttgaccgtgcctctccgcccaattcatcggtc
cggcagttcaatcgcttcctcaagcgtgtagcagaggagaccgaagccgctgtggtgatg
atctctggaaaccacgattctggcgacaggatcgaggctatgtctgtcttttccaccgcg
tctcgtgtgctggtgcgggggattgccgatgcggtggaagcgccgctggtgctgcgtgac
gcgcagggcgaggtcgccttttccgcactgcccttttcctatgaatacgccgcacgcgag
gtgttcagggatgaaagcattaatgcgccggcggaggtagttgccgcccagatcgctgcg
gcaaggaggcaggtgcctgatggagcgcgttgggtcgtcgtggcccatgctttcgtcgcg
ggtggtgcggtcggcgagaccgagcgcgccctgacgcgagtcggaggcatagaaactgtt
ccctccgatgtcttcgatggggcggactatgttgcactggggcatttgcacaagccgcag
gaagtgggcgcgagccatattcggtactccggcgcaccgcttgctttcggtttcgacgag
gcgggaaatgaaaaatccatgacagtcgtcgatcttaaagctgaaggggtcgagatccgc
atcgtaccgttccgaccgatccggcaggttcgctcgcttactggggcattctcggatctt
ctggaaggaacgccgtctgacgatttcatccaggctatcctgacggatgaaaaccctctg
atcgatccgatgaaacggttacgcgcgacctatcccaatgcttgccatctgacctatgcc
cggcaggagcgcgctgcggagaccaaggcgctcggcagcggacggaccgcggtcacgcca
atcgagatgattgtcgacttcgtgaaggttgtgcgcggccgggaaccaaacgccaccgaa
gtcgcgatcatcgcggaaaagctccacgcggtaacctccggggaggagcagacatga
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