Pseudosulfitobacter pseudonitzschiae: SULPSESMR1_04607
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Entry
SULPSESMR1_04607 CDS
T04974
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spse
Pseudosulfitobacter pseudonitzschiae
Brite
KEGG Orthology (KO) [BR:
spse00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spse03400
]
SULPSESMR1_04607 (sbcC)
DNA repair and recombination proteins [BR:
spse03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SULPSESMR1_04607 (sbcC)
Archaeal homologous recombinant proteins
SULPSESMR1_04607 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
SMC_N
AAA_29
AAA_21
ABC_tran
DUF6137
Motif
Other DBs
NCBI-ProteinID:
ASM75764
UniProt:
A0A221K9S9
LinkDB
All DBs
Position
pSMR1-7:75300..78380
Genome browser
AA seq
1026 aa
AA seq
DB search
MRPIRLSLQAFGPFATTEVVDFRSALETGLFGIYGQTGAGKSTLFSAMSFALFGAPTKTD
QEPRSLRSDHAASDLPTEVEFVFELGAKTYLIRRRPAQERPKARGEGTTEDASEASLFDV
TGIPVDILGPSQSGRVIAEKKVSLVGQQVEALLGYGADQFRQIVLLPQGKFETFLAAKTD
ARVEILRDLFDVKIYRDLAARLKEEASEAERALRDQRALYVARLEERGFESAEALELGIA
AAETKVEEKQGVQNGAAMATEAARKALTEGEQIEKAFSAVDTAQQAFDNLEKKTGEVEEL
AKRIEAVRNAIQARDLETALRDAEQESRNAVEAVTKVEAALDIATGAKEVAGKKLVEAQS
GEDRRQQVQADLTRLEAIENQVGQAAALRSAFDDAAKDEGSAKKALTEAIDAREKLKSQR
DATDLALDQARKTETVRGQLTGELAEVNRERVKAAAHVKAQEAVADAQRNVEAASNELAT
RTDAAQAADAALVDAEARLSRTQAIILAEKLTEGAPCPVCGSHDHPAPAHGMPEQSGLTE
AFRSAQVQARTASEARVRAESELGNFRMRLDEKKRALEEQESPERTLAELEVEIARLEGD
VAALGEAVDLDAMAEQLAQLKLKLTEAEAAEATARTAAGKAETDLAGARAKLDTVIEALP
EGLRTPEAVVARREALQREQRQLSEALEVATQQDRAAGEMLTRAQEQLEAAKRARDAQQQ
RVKKAQDDFGARLAEVGLDKAGYDACKAHFPTLDADQKTVSDHREGLIAAHTTLQNAIAA
CADRERPDLAPLQLALADATQTLNAANAALATARTDVSSLTKFKESLAAALAETERLETE
TGPLRGLADLANGKNDFKMTLETFAIGAMFDQVLDAANMRLDPMTRGRYRLTRGLEASGG
RGKRGLEIEVFDINTGKARPTATLSGGETFIAALALALGLADVVESLSGKIRMDTIFIDE
GFGSLDTENGAGTLDQVIQVLAALTEGSRAVGLISHVGLVQEAIPQGFYVRSTPSGSRVE
ERRGLG
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgagacccattcgcctatcgcttcaagccttcgggccatttgcgacaaccgaggtagtc
gatttccggtccgcgctggagacgggtctgttcgggatttatggtcagaccggcgcggga
aagtcgacgctgttttcggcgatgtccttcgcgctattcggggcgccgaccaagactgat
caagaaccacgttcactacgctcggatcacgccgcgtcggatctacctaccgaagttgaa
tttgtctttgagctgggcgccaagacctacctgatccgtcgtcgtccggcgcaggaacgt
ccgaaggcacgcggtgaagggaccactgaggacgcgtcggaagcctcgttattcgacgtc
accgggattccggtggacattcttggtccgagtcagtctggccgtgtcattgcggaaaag
aaagtctcgctagttgggcagcaagtcgaggcgctgcttggctacggggcagatcagttt
cgacagatcgtgctcttaccgcaaggcaagttcgagacgttcttggccgcaaaaacggat
gcgcgggtcgagatattgcgggatctcttcgacgtgaagatctatcgagatctcgccgca
cggctgaaagaagaagcctcagaggcagaacgagcgttgcgcgaccagcgcgctctctac
gtggctcgactcgaggaacgtggttttgagagcgcggaggcgctagaactcgggattgcc
gcagccgaaacaaaagtcgaagaaaagcagggagttcagaacggcgcggcgatggctacc
gaagccgcgcgtaaagctctgaccgaaggcgagcaaatcgagaaagcattttctgctgtc
gacacggcacagcaggcattcgataatctagaaaagaaaacgggcgaggtcgaagaactg
gccaagcgcattgaggctgtccggaatgccattcaggcccgtgatcttgagacggctttg
cgcgatgcggagcaggaaagccggaatgcggtggaggctgtcacaaaggtcgaggcggca
ctagatatcgccactggcgcgaaggaggtggcgggaaaaaaacttgttgaggcacagtcg
ggcgaggaccggcggcagcaagttcaggctgacctgacaaggttggaggcgatcgagaac
caggtcggtcaagcagcggctcttagaagcgcgtttgacgacgctgcgaaggacgaaggt
tcggcgaagaaggctctgaccgaggccatagatgcccgagagaagctcaagtctcagcgc
gatgcgaccgatctggcacttgatcaagcgcgaaagaccgaaacggtgcgaggccagctg
accggtgagttggccgaggtcaaccgagaaagagtcaaggcagcggcgcatgttaaggcg
caagaggctgtcgcggatgctcaacgaaatgtagaagcggcatcgaacgaactggcgaca
agaaccgacgcggcgcaagccgctgatgcggcattggtagatgccgaggcacggctttcg
cgcacgcaagcgatcattctggccgaaaagttgaccgaaggagcgccctgccctgtctgt
ggctcccatgatcatcctgcgcctgcccatggtatgcccgaacaatctggtttgaccgaa
gcgtttcggagtgcgcaggttcaggcgagaactgcctccgaagccagagttcgggccgaa
agcgaactcggcaattttcgaatgcggctcgacgaaaagaagcgggcgctcgaggaacag
gaaagtcctgagcgcacgttagcggaactcgaagttgaaatcgcacggcttgaaggcgac
gtcgccgcgcttggagaagcggtcgatttagacgcgatggcggagcagttggcccaactc
aagctgaaactgactgaggctgaagctgccgaggctacggcgcgcaccgctgcgggaaag
gccgagaccgatcttgccggcgcgcgcgccaagctggacacagtgatcgaggccctgccg
gaaggtctgcgcacgcccgaggcggttgtcgctcgacgggaggctttacagagagagcaa
aggcaactgtccgaggcgctggaagtggcgacgcaacaggaccgagccgccggtgaaatg
ctcacccgtgcgcaagagcagctggaagcagcaaagcgggcgcgcgacgcgcagcaacag
cgcgtgaaaaaggcgcaagatgattttggtgctcggcttgccgaggtcgggctggacaaa
gcgggatatgatgcttgcaaggcgcatttcccgaccctcgatgccgaccagaagacggta
tccgatcatcgtgagggcctgatcgcggctcacacgacattgcagaacgccatagccgct
tgcgcagatcgtgaacgcccggatcttgccccgcttcagctggcgttggcagacgccacc
cagaccttgaacgcggccaacgctgcactcgccacagcgaggacagatgtatcgtcactg
accaaattcaaggaatcgcttgcggcggcgctggccgaaaccgagcggcttgaaaccgag
accggtccgctccgggggctggccgatctggctaacggcaagaacgatttcaagatgaca
ctcgagaccttcgcgatcggtgcaatgttcgaccaggttctcgatgcggcgaatatgagg
ctcgaccctatgacacgtggtcgctaccggctgacgcgcgggcttgaggcatctggcggc
cgcggcaagcgtgggctcgaaatcgaggtcttcgacatcaacaccggcaaggcgcgtccg
acagcaacgctatccggtggcgagacctttatcgcggcactagccctcgcgcttgggcta
gctgatgtggtcgagagcctttcgggcaagatccgaatggacacgatcttcatcgatgaa
ggcttcggcagcctcgacaccgagaatggggcgggcacgctggaccaagtgatccaggtt
cttgctgcgctgacagagggcagccgggctgtgggactgatctcgcatgtcgggctggtg
caggaggctattccacaaggcttctatgtgcgttcgaccccaagcggcagccgggtcgag
gaaaggagggggctgggatga
DBGET
integrated database retrieval system
