Shewanella psychropiezotolerans: FM037_00115
Help
Entry
FM037_00115 CDS
T07745
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh00071
Fatty acid degradation
spsh00280
Valine, leucine and isoleucine degradation
spsh00310
Lysine degradation
spsh00362
Benzoate degradation
spsh00380
Tryptophan metabolism
spsh00410
beta-Alanine metabolism
spsh00640
Propanoate metabolism
spsh00650
Butanoate metabolism
spsh00907
Pinene, camphor and geraniol degradation
spsh00930
Caprolactam degradation
spsh01100
Metabolic pathways
spsh01110
Biosynthesis of secondary metabolites
spsh01120
Microbial metabolism in diverse environments
spsh01200
Carbon metabolism
spsh01212
Fatty acid metabolism
Module
spsh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FM037_00115 (fadB)
00650 Butanoate metabolism
FM037_00115 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FM037_00115 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FM037_00115 (fadB)
00310 Lysine degradation
FM037_00115 (fadB)
00380 Tryptophan metabolism
FM037_00115 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FM037_00115 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FM037_00115 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FM037_00115 (fadB)
00930 Caprolactam degradation
FM037_00115 (fadB)
Enzymes [BR:
spsh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FM037_00115 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FM037_00115 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FM037_00115 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
FM037_00115 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QDO81910
LinkDB
All DBs
Position
complement(25234..27387)
Genome browser
AA seq
717 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAPGSVNKLDRETIDSLNAALDAIKQNSDIQALVLTSG
KSAFIVGADITEFLGLFAQDDSVLLPWIAEANVVFNKLEDLPFPTISAINGFALGGGFET
VLATDFRIADTTARVGLPESKLGLVPGFGGTVRLPRLIGTDNALEWITSGKDQRPEAALK
VGAIDAIVAPENLQASAIQMLKDAVAEKLDWQSRRARKQAPLTLPKLEAMMSFATAKGMV
FKIAGKHYPAPMTAISVIEQAANLKRDEALKIEHQAFVKLAKTDVAQALIGIFLNDQLVK
GKAKKAGKLAKKVDTAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLGEASKLL
AAQIKRGRSTPEKMAKVLNNITATLDYTPVKDVDVVVEAVVEHPKVKSMVLAEVEQHVAD
DAIITSNTSTISINLLAKALKKPERFCGMHFFNPVHKMPLVEIIRGENSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDIMFEAERFGQKNSKGFYAYSVDRRGKP
KKDVDAVSYELLGAEFGELKQFESDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYVDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQSK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaggttgagttacttgaagataatatcgctcggcta
tgctttaacgcaccgggttcagtcaacaagctagatagagaaacgattgactctcttaac
gctgcactcgatgcaatcaagcaaaattcagacatccaagctttagtcctgacttcaggt
aaaagcgccttcatcgttggcgccgacatcactgaatttttaggcttgttcgcccaagac
gatagcgtgctactaccttggatagcagaagcgaatgtcgtatttaataagttagaagat
cttccctttccgactatctcagccatcaacggctttgcactaggtggtggtttcgaaacc
gtactagcaaccgatttccgtattgccgatactacggcaagagtgggattacctgagtct
aagctaggattggttcctggttttggtggtacggttcgccttccgcgtctaatcggtaca
gacaacgccctcgagtggatcactagcggtaaggaccaacgtccggaagcggcacttaaa
gtcggcgctatcgacgctatcgttgcaccagagaatttacaagcttcagcgattcagatg
ctgaaggatgccgtcgcagaaaaactcgactggcagagtcgccgcgctcgcaagcaggcg
ccacttacattacctaagctagaagccatgatgtcattcgccacggcgaaaggcatggtc
ttcaagatagcgggcaagcattaccctgcacctatgacagccatcagcgtcatagagcaa
gcagcaaaccttaagcgagatgaagctcttaagatagagcatcaggcttttgttaagcta
gccaagacagacgtggctcaggcattgattggtatcttcctcaatgaccagttagtcaaa
ggcaaggctaagaaggccggtaaactggctaagaaagtagacacagccgccgtactgggt
gctggcatcatgggtggcggcatcgcctaccagagcgccagcaagggcactcctattgtc
atgaaggatatcgcacagccagctctggagttaggtctgggtgaagcatctaagctgctt
gctgcacagattaaacgtggtcgttccacaccagagaagatggctaaggtgcttaacaac
atcacagcgactctggactataccccggttaaagatgtcgatgttgttgtcgaagccgtt
gtcgaacatcctaaggtcaagtcaatggtactggccgaagttgagcagcatgttgccgac
gatgccatcatcacctctaatacttctactatttcgatcaatctgctggctaaggcgcta
aagaagcctgaacgtttctgtggcatgcacttcttcaacccggtacataagatgccattg
gttgaaattattcgtggtgagaacagctcggaagagactatcgcgactgtagtagcttac
gccagtaagatgggtaagacacctatcgtagtgaatgattgccctggtttcttcgttaac
cgtgtgctgttcccttattttgcaggcttcagcggcctactcgccgatggtggtgatttc
gccgctatcgataaggtgatggagaagcagttcggttggccaatgggcccagcatacctg
ctcgatgttgtcggtttagatacaggccatcacgcacaggctgttatggctgaaggcttc
cctgaccgcatggcgaaagaaggcaaagatgctatcgatatcatgttcgaggcggaacgc
ttcggtcagaagaatagcaaaggtttctatgcttactcagtcgaccgtcgtggcaagccg
aagaaagatgtcgatgccgttagctatgaactgctaggtgccgaattcggcgagcttaag
caattcgaatcagatgagatcatcgcccgcactatgatccctatgatcatagaaaccgtg
cgttgtctcgaagaaggcattatcgcttcacccgctgaagcggatatgggtctggtttac
ggcttaggtttcccaccatttcgaggcggtgtattccgttatgtagataccatgggcgtc
gcaaacttcgtcgctcttgccgataaatatgctcacttaggtggcctatatcaagtaaca
gatgccatgcgtgaacttgccgcaaacaatggcagctactaccagtctaaataa
DBGET
integrated database retrieval system
