Shewanella psychropiezotolerans: FM037_00280
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Entry
FM037_00280 CDS
T07745
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh02020
Two-component system
spsh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FM037_00280
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FM037_00280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spsh03021
]
FM037_00280
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spsh02035
]
FM037_00280
Transcription machinery [BR:
spsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FM037_00280
Bacterial motility proteins [BR:
spsh02035
]
Flagellar system
Flagellar assembly proteins
Stator
FM037_00280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF1492
Surface-like_ins_dom
UPF0122
CTD3
GerE
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QDO81935
UniProt:
A0ABX5WS36
LinkDB
All DBs
Position
complement(61860..62582)
Genome browser
AA seq
240 aa
AA seq
DB search
MNSAQLAYQETNEEKTVNRLSESQVMKQYLPLVKRSVSQLRSHCGAVLAVEDMEQIGMMA
LLESSRRYPGEFDNGFLSFAGQRIRGSILDELRRQDWRPRPVRQQAHELNDAVRKLTRML
GRDPTDIEVSDSMGISRDQYRERLYASQSESMKSLDDMLSAGSHFADKTNVIEQFSSKQT
LKKAISKLSKREQVILSLYYQHELNLKEIAGTLGLTETRICQLHKQAVKHLKEIYQLWER
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaactctgctcaactcgcataccaagagaccaatgaagaaaagacagtaaacagactc
agtgagagccaggtgatgaagcagtatttacctttggtaaagcgatcagtctctcagctt
agaagtcactgcggagccgtacttgctgtcgaggatatggagcagattggcatgatggct
ctactcgaatcctcgagacgctaccccggagagtttgacaatggcttcttatcatttgct
ggacagcgaattcgcggttcaattcttgatgagcttagacgccaggactggcgtcctagg
cccgttaggcagcaagctcacgagcttaatgacgctgtgcgtaaactcacccgaatgctg
gggcgtgatccgacagatatagaagtctctgattcgatggggataagcagagaccaatat
agagaacgtctctatgcctctcaatctgagtccatgaaaagcttagatgacatgctaagt
gcaggtagccatttcgccgataagactaatgttattgagcagttttcatccaaacaaaca
ttaaaaaaggcaatatctaaattaagtaaaagagaacaggtgatcctgtcgctttattat
caacatgaactcaatttaaaagaaattgccgggaccttaggattgactgagacgcggatc
tgccagctacataaacaggcggtgaagcatcttaaggagatttaccaactttgggagcgg
tag
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integrated database retrieval system
