Shewanella psychropiezotolerans: FM037_00510
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Entry
FM037_00510 CDS
T07745
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03030
DNA replication
spsh03410
Base excision repair
spsh03420
Nucleotide excision repair
spsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM037_00510 (polA)
03410 Base excision repair
FM037_00510 (polA)
03420 Nucleotide excision repair
FM037_00510 (polA)
03440 Homologous recombination
FM037_00510 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsh03032
]
FM037_00510 (polA)
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_00510 (polA)
Enzymes [BR:
spsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM037_00510 (polA)
DNA replication proteins [BR:
spsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
FM037_00510 (polA)
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
FM037_00510 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FM037_00510 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
QDO81978
LinkDB
All DBs
Position
complement(104894..107647)
Genome browser
AA seq
917 aa
AA seq
DB search
MPKIAENPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVINMLRSLLKQYEPTQMAV
IFDAKGKTFRNDMYEDYKAQRPPMPDDLRTQIEPLHRIIRAMGLPLVCISGVEADDVIGT
ISTQASKEGRAVLISTGDKDMAQLVDENVTLINTMTNTIMGPDEVTEKFGVGPELIIDLL
ALQGDKADNIPGLPGVGEKTAVAMLTGAGCIDKILAAPEKMPELGFRGAKTMPAKLAEHR
DILKLSYELATIKLDVELEQDWQELTIKPADRDELIKCFGEMEFKRWLAEVLDNKTGSGK
GETAADEEVTRQDIQTEYTTIYTHEELDLWIDKLANAELIAIDTETTSLNYMEAKLVGIS
FAIEVGKAAYLPLGHDYLDAPEQLDQAEALAKLKPLLENSELKKVGQNLKYDISIFANVG
IKLQGIAFDTMLESYVFNSVATKHNMDDLALKYLGHKNISFEEIAGKGVKQLTFNQIDLE
TAAPYAAEDADITLRLHQHLWPRLEKEPELASVFTDIELPLIQILSDIERGGVLIDSMML
GQQSEELARTIDELEQKAFEIADEKFNLSSPKQLQALFFEKLGYPIIKKTPKGAPSTAEE
VLVELALDYPLPKIILQHRSLAKLKSTYTDKLPLMVNAQSGRVHTSYHQANAATGRLSSS
EPNLQNIPIRTEEGRRIRHAFIAREGKKVLAADYSQIELRIMAHLSQDKGLLTAFAAGKD
IHRATAAEVFDVDFDDVTTEQRRRAKAVNFGLIYGMSAFGLAKQLDIPRPEAQKYIDTYF
KRYPGVLKYMEETRAEAADLGYVSTLYGRRLYLPAIKDRNAMRRQAAERAAINAPMQGTA
ADIIKKAMINIAHWIATETQGEIDMIMQVHDELVFEVDSDKAEQMQEKVCQLMADAVSLD
VELLAEAGIGDNWEQAH
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaaattgccgaaaatccgttagttctagtagatggctcctcctacctttatcgt
gcctattatgcaccaccacatcttaccaactctaagggtgaagccaccggcgctgtttat
ggcgtaattaacatgttacgtagccttctcaagcagtatgaaccgactcagatggcggta
attttcgatgcgaaaggtaaaacgttccgtaacgacatgtatgaagattacaaggcccaa
aggccgcctatgccagatgatcttcgcactcagatagagcctcttcatagaattatacgc
gctatgggactccctctggtatgtatttccggagtcgaggccgacgatgttatcgggact
atctctacccaagcgagtaaagagggtagagccgtgcttatcagcaccggcgataaggat
atggcccagcttgtcgatgagaatgtcaccctgatcaacaccatgaccaataccatcatg
gggccggacgaagtcaccgaaaaatttggtgtcggacccgagctcattatcgacttatta
gccctacagggtgacaaagccgataatattcccgggcttcctggtgtaggcgagaaaact
gccgtagccatgctaaccggtgccggctgcatagataagattcttgccgctccggagaag
atgccggaactcggcttcagaggcgctaagaccatgccagctaaactggccgaacacagg
gatatactcaagctatcctatgaactggcgacgattaagttagatgttgagctcgaacaa
gactggcaagagctcactatcaagccggcagaccgggatgaattgataaaatgtttcggt
gaaatggagttcaagcgttggttagccgaagtactcgataataagacgggctcgggtaaa
ggcgagacagcagccgatgaagaggtaaccaggcaagatattcagaccgaatacaccact
atatacacccatgaagagttagatctctggatagataaactcgcgaatgcagagctcatc
gccatagatacagagacgaccagtctcaactatatggaggccaagttagtcggtatatcc
ttcgcgattgaagtgggtaaggctgcctaccttccgctaggccacgattatttagatgca
ccagagcaactggatcaggctgaagccttagcaaaactcaaacctttgcttgaaaattcc
gagcttaaaaaagtaggccaaaaccttaaatacgacatcagtatttttgctaatgtgggc
attaagctacaaggtatagccttcgatactatgctcgagtcttacgtgttcaattcagtc
gcaactaagcacaacatggatgatttggcacttaaatatctgggtcacaagaatatcagc
ttcgaagagatcgcaggcaaaggtgtcaaacagctcaccttcaatcagatcgacctggaa
accgccgctccctacgctgccgaagacgccgacattacccttagattacaccagcactta
tggccaagattagagaaagagccggaactggcttcggtatttaccgatattgaactacca
ctcatacaaatactgtcagatattgaacgtggaggcgttttaatcgatagtatgatgtta
gggcaacagagtgaagagctcgccagaaccatagatgaattagagcaaaaagccttcgag
atcgcggatgagaaattcaacttaagttcacctaagcagcttcaggcactattttttgaa
aaattgggctatcccattatcaagaagacgcctaagggggcaccttcgactgccgaagaa
gtattagtcgagttagccttagattacccgctacctaagattatactgcagcacagaagc
ttagctaagctgaagagtacctacacggacaagttacccctcatggtcaatgctcagagt
ggccgggtacacacgagttaccatcaagccaatgcggcaaccggacgcctgtcttccagt
gagcccaacctgcaaaacatccccattcgtaccgaagagggccgtagaatacgtcacgcc
ttcattgcacgagaaggtaagaaggtactcgcagccgattactcacaaatcgaattgcgt
atcatggctcacctgtctcaagataagggtctactcacggccttcgccgcaggtaaggat
attcatagggcaaccgcagccgaggtattcgatgtagacttcgatgacgtcactacagaa
caacgccgtcgcgccaaagcggtaaacttcggactcatttatggcatgtcggcattcgga
ctcgctaaacagttagatattcctcgccctgaggctcaaaagtatatcgatacttacttt
aaacgttacccgggtgtgctcaagtatatggaagagactcgtgccgaagccgcagatctt
ggttacgtctcgaccctctacggtcgccgactttatctacccgccattaaagatagaaat
gccatgagacgccaagccgcagagcgggcggcaattaatgcaccgatgcaaggtactgca
gccgatataatcaagaaagccatgatcaacatagcccattggatcgctaccgagactcag
ggtgagatcgatatgatcatgcaagtgcacgatgaactcgtgttcgaagtcgacagcgat
aaggctgaacagatgcaagagaaggtttgtcagctgatggccgatgctgtcagcctggac
gtcgaactgcttgcggaagctggaataggtgacaattgggaacaggcacactag
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integrated database retrieval system
