Shewanella psychropiezotolerans: FM037_01805
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Entry
FM037_01805 CDS
T07745
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FM037_01805 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_01805 (priA)
Enzymes [BR:
spsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FM037_01805 (priA)
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FM037_01805 (priA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
Helicase_C
ResIII
WHD_PriA
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
AAA_16
AAA_19
Zn_ribbon_6
DUF2321
DUF5816
Motif
Other DBs
NCBI-ProteinID:
QDO82198
UniProt:
A0ABX5WWW7
LinkDB
All DBs
Position
complement(417497..419692)
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AA seq
731 aa
AA seq
DB search
MPLFVEVALPVPMRQTFSYNVPESVTSVPKKGMRVKVPFGRQQLIGLVTKTSDTCNLAPN
QIKSILELLDDEPLLPDSLYKLTAWAARYYFCSLGQMLSQALPVALRKGAEVSAETTTFW
SMTAAGTAASLDTLKRAPAQKKVMEALLAAEMTQEELTSLALSKSAIKALQDKGWIAKDE
RRNQIDLSWRDNLELGEEPLTLNPEQAIAVATLNQQSGYHCTLLEGITGSGKTEVYLSLL
ESVLKQGKQALILVPEIGLTPQTISRFKSRFKVKVAVIHSGLTDNQRLAAWRQAKTGEAA
IIIGTRSALFTPMAYPGTIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEKIPVLLGTAT
PSLESLQNALSGRYKHLELGQRAGNAEKVRQGIIDISNQPLKTGLSHALLNEMRIHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEIRCHHCGNHYAIPRQCHK
CGSTMLMGQGVGTEQLAEALEKEFPKYPVVRIDRDTTSRKGALEAHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVSGRAGRARKPGTVLMQT
HQANNAILRELMHKGYGEFARAQLNERKQALLPPAWHMLLIRAEAHQAIDADNFLSQVAQ
FLPQNDESEVIGPMPAPMDKKAGKFRRHLIFQTKSRNQLQQAFEHAQPQIEALPLAKRCK
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgttcgttgaggttgctcttcccgttcctatgcgacaaaccttcagttataac
gtacctgaatctgtcacatctgtgcctaaaaagggcatgagagtcaaagttccattcggt
cgtcagcagttaataggtctagtcactaaaactagcgatacatgtaacttagcacctaat
caaataaaatctatccttgaactgctagatgacgaacctttactgcctgattctctttat
aaactcactgcgtgggcggctagatattatttctgtagtttaggccaaatgctgtctcag
gcccttcccgtcgcactccgtaaaggcgccgaagttagcgctgaaaccacaacattttgg
tccatgactgccgcaggaacggctgcctcgttggacacgctaaaacgagctccggcacag
aagaaggtgatggaagcgctactcgcagctgagatgactcaagaagaactcaccagttta
gccctgagtaagtcggcaattaaggccttacaagataaaggctggatagctaaagatgag
cgcaggaaccagatagatctcagttggcgagacaatcttgagctaggggaagagccattg
acgctcaaccccgagcaggcaatagcagtcgcgaccctcaatcagcaatcaggctaccac
tgcaccttgctcgaaggcatcacaggctcaggcaaaactgaagtttacctctccttactc
gaatctgtactcaaacaaggaaaacaggcactaatactagttcctgagataggcctgaca
cctcaaaccatcagtcgcttcaagagccgcttcaaagttaaggtcgcggtcatccattca
ggattaaccgacaaccaaagattagcggcatggcgtcaggcaaaaaccggcgaagccgcc
atcatcataggtacacgctcggcgctcttcacccctatggcttatcccgggacgataatt
ttagacgaggagcacgattcaagttttaaacaacaggaaggtgtcggctatcatgctagg
gacctggcagtcatgcgtgggcatctggagaagatccctgtcttactcggtactgcaacg
ccatcactggagagtctgcaaaatgcactcagcggacgctacaagcacctcgaattaggc
caacgagcgggcaacgccgagaaagtccgtcagggcattatcgacatcagcaaccagccc
ctgaaaacaggtctgtcccatgctctgctcaacgagatgcggatccatttagatgccggt
aaccaggtgctcctgttcctcaatcgcagagggtttgcacccgccttactatgccatgaa
tgtggccatctccatgaatgcgatcgctgcgacgccttctttaccgtacatcaatctctg
ggtgagattcgttgccatcattgcggcaatcattacgccattccacgtcaatgtcataag
tgtggcagcaccatgttgatgggccaaggtgtcggcactgagcagctcgccgaggcattg
gaaaaagagttccctaaatatccagtggttcgcatcgatcgcgataccaccagcagaaaa
ggcgcactcgaggcccaccttaatgctatccataagggggaatataagatactggtgggt
actcagatgctagctaagggccaccatttcccagacgtcaccttagtcggcttgctcgat
gtcgatggcgccctgtttagtgccgacttcagagcaccggaacgtttcgggcaactctat
acccaagtttcaggacgagcgggacgtgccagaaaaccaggcacagtcctgatgcagaca
catcaggccaataacgccattttacgtgaactcatgcataaaggttatggcgagtttgcc
agagcacagcttaatgaacgtaaacaagcactattaccaccggcctggcatatgctgttg
atacgcgccgaagcccatcaggccatagatgccgataactttctttcccaagtggctcaa
tttctcccccaaaacgatgagtccgaagttataggtcccatgccagcgcctatggacaaa
aaagccgggaaattccgcagacacctgatttttcagactaaatcaagaaaccaactgcaa
caggcattcgaacatgcacagcctcaaattgaagctctgccgctggctaagcgttgtaaa
tggagcttagacagagatccacaagatctgctgtag
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