KEGG   Shewanella psychropiezotolerans: FM037_01830
Entry
FM037_01830       CDS       T07745                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
spsh  Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:spsh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spsh03019]
    FM037_01830 (csrD)
Messenger RNA biogenesis [BR:spsh03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FM037_01830 (csrD)
SSDB
Motif
Pfam: EAL GGDEF GAPES4 bCoV_NSP1
Other DBs
NCBI-ProteinID: QDO82202
LinkDB
Position
423767..425677
AA seq 636 aa
MKLTRLLTNKLTSFWLLSLAAVAFIFLLVALVSFTQLTYKFQQQKVTELESMLIHHYEHE
NNKALSTWLPSILTAYNTVSLTLRAEGQILYEYGPEKLGAGMITYERQLLKADNLILVIT
LPQPFKMYSLSWYEFSILVIGLLSISVFVFFGHRWLSIQLQGIEDLAVRSKLILENEYDK
ALAERGDGRPRMINRALTHLLLELDDAEKHRARFDQFIRSNTFLDPETGIGNRLFLKNRL
DALSNDKGMMAPGVLFLLEMEDMDLLQQELGDDSIDEMLHQTISDINQILDSQANSIFSR
RSFNQFAIVVPQISLKDVEKLAAKLLKVCLSQNVPETENSEDFFHIGAAYFKVGDSKEQL
LDESERALRAAQFQGTSGWFMYDKGAVDEELAKGSVRWRSFLEYALVNRRLVVFSQPVVD
SDMETHHLEISSRIRDNKNNLVRATLYIPMAIKCGLTPQFERQVIETVLFDLLCDPKGRT
TKFSINLSLDTLMSRAFIRWLKTTLLEYRHLTPWLIFEINEDIVVHHKEQLKSRLDMIKK
MGASLCVDRVGQQVVSTQYIKECHFDLIKLDRSIVTQIHLRQENQLFVRSLIGGLYRTDV
QVFAEGIESFEEWQTLKILGVSAGQGNLFSEPVEEI
NT seq 1911 nt   +upstreamnt  +downstreamnt
atgaaactgacacgacttttaactaataaattgaccagcttttggctactttctttggca
gccgttgcatttatatttttgcttgttgccctagtcagcttcacgcaattgacctataaa
tttcaacagcagaaggtaactgaactcgagtctatgctcattcatcattatgagcatgag
aacaataaagcactctctacctggctcccctccatcttaaccgcgtataacactgtgagt
ttgaccttgcgcgccgaaggtcaaatactctacgagtatggacctgaaaaacttggtgca
gggatgatcacctatgagaggcagctgctcaaggctgacaatctcatcttagtgatcacc
ttacctcagccatttaaaatgtactcactttcctggtatgaattctccatcttagttatt
ggcttactttctatctctgtgtttgttttcttcggccacagatggttatcgatacagcta
cagggcatagaagatctggcagtgcgcagtaaactgattctagagaatgaatatgataag
gccttagccgagagaggagatggcaggccgagaatgataaatcgtgccctgacacatcta
ttattagagctagatgatgcagagaagcatagagctagattcgatcaatttatccgctca
aatacgtttttggatccggaaactgggataggaaatcggctatttctcaagaatcgtctc
gacgccttgagtaacgataaaggtatgatggctcctggtgtgctgtttttactcgagatg
gaagatatggatctgctgcagcaagagcttggtgatgactctatagatgagatgttgcat
cagacgattagcgatattaatcagatcttggacagtcaggctaacagtattttttctcgt
cgttctttcaatcagttcgccatcgtcgttcctcaaatctctttaaaagacgttgaaaaa
ttagccgctaaattactcaaggtgtgcttgagtcaaaacgtacccgagacagagaacagc
gaagattttttccacataggtgcagcctactttaaagtcggtgacagtaaggagcagtta
ctcgatgagtcagagagagcccttagggcggctcagtttcagggaaccagtggctggttt
atgtatgataaaggggccgtggatgaggagttggcgaaggggtctgttaggtggcgcagc
tttctcgagtatgctctggtaaatagacgtttagtggtcttttcccagcctgtggtcgac
agtgatatggaaactcaccacttagagatatccagtcgaatacgtgacaataaaaacaac
ctggttagagcaacgctgtatatacctatggcgataaaatgtggtctgacacctcaattt
gaacgtcaggttattgagaccgtgttgttcgatctcctctgtgatcctaagggcagaacc
actaagttcagcatcaatctcagcttagacaccctgatgagtagggcatttatccgctgg
cttaaaacgaccctgttagagtatcgacatctcactccctggctgattttcgagatcaat
gaggatatagtcgtgcatcataaggagcagctaaaatccagactcgatatgattaagaaa
atgggcgcaagcttatgcgtcgaccgcgtggggcagcaggtagtcagtactcaatacatc
aaagagtgtcatttcgatctgatcaaactggatcgttcaatcgtgactcaaatacatctt
cgtcaagaaaatcagttgtttgtgagaagtcttatcggtggtttatatagaactgatgtt
caggtctttgccgaaggaatagagtctttcgaggagtggcagaccctgaaaattttaggt
gttagtgccggacagggaaacttgttcagtgagccagttgaagaaatataa

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