Shewanella psychropiezotolerans: FM037_02080
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Entry
FM037_02080 CDS
T07745
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsh03032
]
FM037_02080
03036 Chromosome and associated proteins [BR:
spsh03036
]
FM037_02080
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_02080
DNA replication proteins [BR:
spsh03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FM037_02080
Chromosome and associated proteins [BR:
spsh03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FM037_02080
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FM037_02080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
Urease_beta
Peptidase_C80
Motif
Other DBs
NCBI-ProteinID:
QDO82245
LinkDB
All DBs
Position
complement(483293..483568)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKTELVAKMAENADLTKAEAARALKSFEETITEALKGGDKISIIGFGSFETTNRAARTG
RNPQTGKEIQIPAATVPKFKAGKTLKDSVNQ
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataagactgaacttgttgcaaaaatggctgaaaatgcggacctgactaaagcagaa
gctgcacgcgcactaaaatcttttgaagagacaatcacagaagccctgaagggtggtgat
aaaatctctattattggctttggttcttttgaaactactaatcgagctgcacgtactggt
cgtaacccacagacgggtaaagagatccagatcccagctgcaaccgtacctaagtttaaa
gcaggcaaaacactgaaagatagcgttaatcagtaa
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