Shewanella psychropiezotolerans: FM037_02285
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Entry
FM037_02285 CDS
T07745
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FM037_02285 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spsh03019
]
FM037_02285 (groL)
03110 Chaperones and folding catalysts [BR:
spsh03110
]
FM037_02285 (groL)
03029 Mitochondrial biogenesis [BR:
spsh03029
]
FM037_02285 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsh04147
]
FM037_02285 (groL)
Enzymes [BR:
spsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FM037_02285 (groL)
Messenger RNA biogenesis [BR:
spsh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FM037_02285 (groL)
Chaperones and folding catalysts [BR:
spsh03110
]
Heat shock proteins
HSP60 / Chaperonin
FM037_02285 (groL)
Mitochondrial biogenesis [BR:
spsh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FM037_02285 (groL)
Exosome [BR:
spsh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FM037_02285 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FM037_02285 (groL)
Exosomal proteins of breast cancer cells
FM037_02285 (groL)
Exosomal proteins of colorectal cancer cells
FM037_02285 (groL)
Exosomal proteins of bladder cancer cells
FM037_02285 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF2868
Motif
Other DBs
NCBI-ProteinID:
QDO82281
UniProt:
A0ABX5WZ60
LinkDB
All DBs
Position
530226..531866
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKEVLFGNDARVKMLAGVNILANAVKVTLGPKGRNVILDKSFGAPLITKDGVTVAKDI
ELEDKIENMGAQMVKEVASKANDEAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKNLSQECADTNAITQVGTISANSDETIGEIIATAMERVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELESPYILLVDKKVSNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVIITKDDTTIIDGAGEESQIKARVSQIKIQAEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEIEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RVASKIADIEVLNEDQKHGVVIAIRAMEAPLRQIAINAGEEGSVVANNVKNGTGNYGYNA
GNDTYGDMLEMGILDPTKVTRSALQFAASIAGLMITTECMVAEVPQDASAPDMGGMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagtattatttggtaacgacgcacgtgtaaaaatgcttgcgggcgta
aacattctagcaaacgcagttaaagtcactctgggccctaagggtcgtaatgtgattctg
gacaagagcttcggcgcaccactgatcaccaaagatggtgtcacagtagctaaagatatc
gaacttgaagacaagatcgagaacatgggcgcgcagatggttaaagaagttgcttctaaa
gccaacgacgaagccggtgacggtaccactaccgctaccgttcttgctcaatctatcgtt
aacgaaggccttaaagccgtcgcagctggcatgaacccaatggatcttaagcgcggtatc
gacaaagcggttattgcagccgttgccgagcttaaaaacctatctcaagagtgtgctgac
acaaatgctatcactcaggttggtactatctcagctaactctgacgagactatcggcgaa
atcatcgcaacagcgatggagcgcgtaggtaaagaaggcgttatcacagttgaagaaggt
caggctctggaaaacgagctggacgtagtagaaggtatgcagttcgatcgcggttacctg
tctccatacttcatcaacaagccagagactggcagtgttgagcttgaaagcccatatatt
cttcttgtagacaagaaagtatctaacattcgtgagctactgcctatccttgaaggtctg
gctaagactggtaagccactgcttatcgtcgccgaagacgttgaaggtgaagccttagcg
acactcgtagtcaacaacatgcgcggtatcgtgaaagttgctgccgttaaggcaccaggt
ttcggtgaccgacgtaaggctatgctacaagatatcgctatcttgaccggcggcaccgtt
atcgctgaagagattggtctagagcttgagaaagccactctggaagatcttggtacggct
aagcgcgttatcatcactaaagatgacacgactatcatcgacggtgctggtgaagagagc
caaatcaaggctcgcgtttcacagattaagatccaggctgaagagtctacctctgattac
gacaaagagaagctacaagagcgcatggctaagctagccggcggtgttgcagtgatcaag
gtcggtgcagctaccgaaattgagatgaaagagaagaaggcacgtgtagaagatgcactt
cacgcgactcgcgcagcagtcgaagagggtgttgttgccggtggtggtgttgctctggta
cgtgttgccagcaagattgctgatattgaagtacttaacgaagatcagaagcacggtgtg
gttatcgcaattcgcgccatggaagctcctctacgccagatcgcgattaacgcgggtgaa
gaaggttcagttgttgctaacaacgttaagaacggcactggtaactacggttacaacgca
ggtaacgacacttacggtgacatgcttgagatgggtatcctagatccaactaaagtgact
cgtagcgcgctacagttcgcagcatctattgctggcctgatgatcacaaccgaatgtatg
gttgccgaagttccacaagatgcttctgcacctgatatgggcggcatgggtggtatgggt
ggtatgggcggcatgatgtaa
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