Shewanella psychropiezotolerans: FM037_03915
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Entry
FM037_03915 CDS
T07745
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsh03009
]
FM037_03915 (rimK)
Ribosome biogenesis [BR:
spsh03009
]
Prokaryotic type
ribosomal protein modification factors
FM037_03915 (rimK)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Zn_protease
Rimk_N
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
GARS_A
R2K_3
ATPgrasp_Ter
Motif
Other DBs
NCBI-ProteinID:
QDO82537
LinkDB
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Position
883275..884669
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AA seq
464 aa
AA seq
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MTNKIIVGSEEWCSLPGLGIKAVKARVDSGATTSSIHAINIKTFKRNGSTWVSYEVHPIQ
GSRKVTLLCESKLIDRRVIKSSNGETERRYVIREQLQLGNQSWDVDLTLSNRANMGFRML
LGREAMGQKILVDPSANFNFGDYTEDETNLLYGNKNMPSTGLKIGLLASNPNLYSNRRIM
EAGQQRGHEMFFYNIQQCYMKLDASEPEVHYRGGRILNDLDAVIPRIRPSMTFYGCALTR
HFESLGVMALNNSAAITQSRDKLFSLQLLQKNNLAIPTSGFANSPADTTDLIDMVGGAPL
IVKLLEGTQGKGVVLAETRKAAESVINAFKSLKANLLVQEFIKEAQGKDLRCFVIDGKIV
ASIERTAAPGEFRANIHQGGTASIVQISPEEKKLAIKAAKTMGLQVAGVDIIRSSKGPLL
LEINSSPGLEGIEAATGIDVASAMIDSIEKKLGWKRVSLEDAQA
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgactaataaaatcattgttggcagtgaagagtggtgctctttacctgggctaggtatc
aaggcggttaaggctcgtgttgactccggggctacaacatcctccattcacgcaatcaat
attaagacttttaagcgtaatggaagcacttgggtcagttatgaagtccacccaattcag
ggcagccgaaaggtgaccttactctgtgagtctaagctaatcgatcgccgggttattaag
agttccaatggtgaaactgagagacgctacgttatccgtgaacaactgcagcttggcaat
caaagctgggatgtggatctgaccttatcaaatcgcgccaatatgggctttagaatgctc
ttaggtcgagaggccatggggcagaagatcttggttgacccttcggctaactttaatttt
ggtgactataccgaagatgaaaccaacctcttatacggtaataaaaatatgccgagtaca
ggcctcaaaattggcttgcttgccagtaatcctaacttgtatagcaatcgtcgtattatg
gaggcgggtcaacagcgtggtcatgagatgtttttctataacatacagcaatgttatatg
aagctggatgcctcagagcctgaagtacattaccgaggcggcaggatcctcaatgacctt
gatgcggttattcccagaattcgtcctagcatgaccttctatggttgcgccttgacgcgt
cacttcgagagcctgggggtcatggcattgaataattcggcagcgatcactcagtcgcga
gacaagttgttctctctgcagttattgcagaaaaataacttagcgatacccaccagtggt
tttgctaattcgccggcggataccacggatttaatcgatatggtcggtggggcgccgtta
atagttaaactgctcgaaggaactcaaggtaaaggtgttgttctggccgagacccgaaag
gctgcagagagtgtgatcaatgcgtttaaatccctgaaggctaacctgttggttcaggag
tttatcaaggaggcccagggcaaagatctgcgctgtttcgtgattgacggcaagattgtc
gcgtcgatagagcgcaccgccgcgccgggtgagttcagggcgaacatccatcagggcggc
acagcttctatcgtgcaaatcagccctgaagagaagaagttagcgatcaaggcggctaaa
accatgggtcttcaggttgcaggcgtcgacattattcgctcgagcaagggacctctgttg
ctggaaattaactcatcgccaggcttagagggcatagaagcggcaactggcatagatgtc
gccagcgccatgattgactccatagagaaaaagctgggctggaagcgagtatcattagag
gatgctcaagcctaa
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