Shewanella psychropiezotolerans: FM037_05400
Help
Entry
FM037_05400 CDS
T07745
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spsh03036
]
FM037_05400 (xerD)
Chromosome and associated proteins [BR:
spsh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
FM037_05400 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
Phage_int_SAM_5
POLQ_helical
Motif
Other DBs
NCBI-ProteinID:
QDO82768
LinkDB
All DBs
Position
1222245..1223162
Genome browser
AA seq
305 aa
AA seq
DB search
MAEPAESKQYQPDPLIDTFLDDLWSNRGLSDNTLSAYRTDLRHFDRYIQKLGAGLVQVSQ
ELIRDYLDVRFDKGFARTSSARLMSSLRRFYGFLLLKKLIQADPIARIKSPKLARKLPDS
LSEADVDILLNEPDLQDPIECRDRAMLELLYATGLRVTELVSLTMEQLSLRQGLVRVVGK
GGKERLVPLGELAVNEVEHYLEGARAELLKGKLSDVLFPSKRGQMMTRQTFWHRIKLYAL
RAGIVTHISPHTMRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKARLSQLHSE
HHPRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
ttggctgagcctgctgaatctaaacaatatcaacccgacccgcttatcgatacctttctt
gatgacctctggtcgaaccggggattgagtgataatacgctctcagcctatcgaaccgac
ctacgccatttcgatcgttatattcagaaattgggggccgggttagttcaggtatctcag
gaattgatccgtgactatctggatgtgagatttgataaaggtttcgcccgtaccagcagt
gctcgtctgatgagtagtctgaggcgtttctatggttttttgttgcttaaaaagttgatt
caagcggatcctatcgctcggataaagtcgcctaaattagcccgtaagttacctgattca
ctcagcgaggccgatgtggatatcttgctcaatgaaccggatctacaagatcccattgag
tgccgtgacagggctatgctggagcttctctatgctaccgggctacgagtgactgaattg
gtgagcctgaccatggagcagctcagcctcaggcaggggctggtgagggtggtgggcaaa
ggtggtaaggagaggctagtgcctctgggagagcttgccgtcaacgaagttgaacactat
cttgagggagccagagccgagttgcttaaaggcaagctcagtgatgtgttattcccctct
aaacgtggccagatgatgaccaggcagaccttctggcatagaattaaactctacgcgctt
agggctggcatagtgacgcatatctccccccatacaatgaggcatgctttcgcgacgcac
ctgctaaatcatggcgcagatctgcgtgtggtgcagttgttactgggacatagcgatctg
tccaccacacagatttacacccatgtggccaaagccagactcagtcagctccacagcgag
catcaccccaggggctag
DBGET
integrated database retrieval system
