Shewanella psychropiezotolerans: FM037_06260
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Entry
FM037_06260 CDS
T07745
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03030
DNA replication
spsh03430
Mismatch repair
spsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM037_06260 (holA)
03430 Mismatch repair
FM037_06260 (holA)
03440 Homologous recombination
FM037_06260 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsh03032
]
FM037_06260 (holA)
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_06260 (holA)
Enzymes [BR:
spsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM037_06260 (holA)
DNA replication proteins [BR:
spsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM037_06260 (holA)
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM037_06260 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QDO82906
LinkDB
All DBs
Position
complement(1417566..1418606)
Genome browser
AA seq
346 aa
AA seq
DB search
MRVYPDQLLRNLSPLKQCYLIFGDDPWLCETSRSQIYHQAKSQGFEEKIQLTQESGFNWN
ELVDQWQAMSLFSSRRVIELILPQAKPGAEGGTIFQSLMQMANPDVLLIITGPKLAAEQT
KSKWFKTLDSQGIYVPCMTPEGSQFQRWLEGRIQHFALNLTRDAKDMLFSLYEGNLLAAD
QSLQLLQLLSPNEQIDSPELSRYFEDQSRFSVFQLTDAMLNNRQDKAQHILSQLKAEGVA
MPIILWGIFKELAILLQLKSAQEAQESLQGLWGKLRIWDKRKPFYLAALNRLSQFQIEAL
LASASDIELKLKQQGIEDWTGVSHLSLLFDPKAHAALSHIQLNDWS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtctatccagatcaactcctacgtaatctctctcccttgaagcagtgttatctc
atcttcggcgatgatccttggctgtgcgaaaccagtcgtagccagatctatcatcaagcc
aagagtcaaggtttcgaggagaaaatccaactgacccaggaaagtggatttaactggaat
gaattggtcgatcaatggcaagccatgagcctgttttccagccgtagagtgatcgaatta
attttacctcaggccaagcctggagccgaaggcggcactatatttcaaagcctgatgcag
atggctaatccagatgtgctattgatcatcaccggacctaagctcgcagcggaacagaca
aagagtaaatggttcaaaaccttagatagccaaggtatatatgttccttgtatgaccccc
gaaggttcacaatttcagcgttggttagagggtcggatccaacacttcgcgctaaactta
actcgcgatgctaaagatatgctgttcagcctctatgaggggaatttactcgcagccgac
cagtcattgcagctgctgcagttattgagcccaaatgagcagatagacagcccggagctg
agccgttatttcgaagaccaatcgcgttttagcgtgtttcagctcactgatgctatgctc
aataaccgtcaggacaaggcgcaacatatcctctcccagctaaaagccgaaggcgtcgcc
atgccgattatcttgtgggggatattcaaggaactggccattcttttacaattaaaatca
gcccaggaggcccaagaatctttgcaaggcctctggggtaaattacgcatttgggataaa
cgaaaacctttttatctggcagccttaaacagactgtcccagttccagatagaggcctta
ctcgccagcgcttcagatatagagttaaaactgaaacaacaaggtatagaagattggact
ggcgtgagtcatctgagcttactgttcgatcctaaagcccatgcggccttatctcatatt
caactcaacgactggagctaa
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