Shewanella psychropiezotolerans: FM037_06305
Help
Entry
FM037_06305 CDS
T07745
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsh03016
]
FM037_06305 (miaB)
Enzymes [BR:
spsh01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FM037_06305 (miaB)
Transfer RNA biogenesis [BR:
spsh03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FM037_06305 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
B12-binding
TRAM_2
Amdase
Motif
Other DBs
NCBI-ProteinID:
QDO82913
LinkDB
All DBs
Position
complement(1428930..1430354)
Genome browser
AA seq
474 aa
AA seq
DB search
MSKKLHIKTWGCQMNEYDSSKMADLMDEYKGYTLTDDAAEADVLLLNTCSIREKAQEKVF
HQLGRWKKLKDKNPNLIIGVGGCVASQEGKMIKERAQCVDIIFGPQTLHRLPEMVDQVKQ
GGKAVIDISFPEIEKFDRLPEPRADGPTAFVSIMEGCSKYCSFCVVPYTRGEEVSRPVDD
VILEVAQLAEQGVREVNLLGQNVNAFRGATHDDDICTFAELLRYIAAIDGIDRVRFTTSH
PIEFSQDIIDVYEDTPELVSFLHLPVQSGSDHILTQMKRGHMAIEYRSIIRRLRKARPDI
QISSDFIIGFPGESKQDFADTMKLIEDVAFDHSFSFIYSARPGTPAADLPDDVTLAEKKE
RLAILQERITQQAMRYSRQMLGTVQRILVEGPSVKNPMELRGRTETSRVVNFEADPKHIG
SFVDVEIVDVYANSLRGTFIRGEDEMDLRRSLRPSDIVLKHKKDDELGVTQYIP
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaactccatatcaaaacctggggctgtcagatgaatgagtatgactcatcc
aagatggccgacctgatggacgaatataagggctacaccctgacagatgacgctgcagaa
gccgatgtgttgttactgaacacctgctctattcgtgaaaaggctcaggaaaaagtgttc
catcaacttggacgctggaagaagttaaaagataaaaatccgaacctaataataggtgtc
ggtggctgcgttgcctctcaggaaggcaagatgatcaaagagcgtgctcaatgcgtcgac
atcatctttggcccgcaaaccttgcatcgtttgcctgagatggtcgatcaggtcaagcaa
ggcggcaaggctgttatcgatatcagcttccctgaaatcgagaagttcgatcgactgcca
gagcctagagccgatggtccgacggctttcgtttcgataatggaaggctgtagtaaatat
tgctctttctgcgtggtaccatacacacgtggcgaagaggtgagccgtcccgtggatgac
gtcatcctggaagtcgctcagcttgccgagcaaggtgttcgtgaagtcaatttactgggc
cagaatgtgaatgcatttcgcggcgcgacccatgatgatgatatctgtacctttgccgag
ctactgcgttatatcgccgctatcgacggtatcgacagggttagatttaccaccagccat
ccaatcgaattctctcaagacatcatagatgtctatgaagatacccccgaactggttagc
ttcctgcacctgccggtacaatcgggttcagatcatattctgactcagatgaaacgtggt
catatggctatcgaatataggtcgatcattcgtcgtctgcgtaaggcgcgtcctgatatt
cagatcagctcagacttcatcattggcttcccgggggaatctaagcaagatttcgccgac
accatgaagttgattgaagatgtcgctttcgatcatagttttagctttatctatagtgca
cgccccggcactcccgcagctgatctaccagacgatgtaactctggcagagaagaaagag
cgcttggccatcttgcaagagcgtatcactcagcaggcgatgcgttacagccgtcaaatg
ttgggcacagttcagcgcattctggtcgaaggcccttcggtcaagaacccaatggagctt
agaggacgcactgaaaccagtcgtgtggttaacttcgaggccgatcctaaacacataggc
agcttcgtcgatgtcgaaattgtggatgtctacgccaactcactgcgtggcacctttatt
cgcggtgaagacgagatggatctacgtcgctcattaagaccttccgatattgttttgaaa
cataagaaagacgatgaattaggtgtgacacagtacataccttaa
DBGET
integrated database retrieval system
