Shewanella psychropiezotolerans: FM037_06745
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Entry
FM037_06745 CDS
T07745
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh00220
Arginine biosynthesis
spsh00240
Pyrimidine metabolism
spsh00250
Alanine, aspartate and glutamate metabolism
spsh01100
Metabolic pathways
spsh01110
Biosynthesis of secondary metabolites
spsh01240
Biosynthesis of cofactors
Module
spsh_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
FM037_06745 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
FM037_06745 (carB)
00220 Arginine biosynthesis
FM037_06745 (carB)
Enzymes [BR:
spsh01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
FM037_06745 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp_3
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QDO82983
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All DBs
Position
1516108..1519326
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AA seq
1072 aa
AA seq
DB search
MPKRTDIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRNIIAKERPDAILPTMGGQTALNCALELESKGVLKEFNVEMIGATA
DAIDKAEDRGRFDKAMKAIGLECPRAGFAHTMAEAFAVQETLGFPCIIRPSFTMGGSGGG
IAYNIEEFEEICTQGLDLSPTSELLIDESLIGWKEYEMEVVRDKNDNCIIVCSIENFDAM
GVHTGDSITVAPAQTLTDKEYQLMRNASIAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKIAAKLAVGYTLDELKNDITGGATPASFEPAIDYVVTKMP
RFNFEKFAGANDRLTTQMKSVGEVMSIGRTFQESLQKALRGLEVGKNGLDPIIDIENADA
MKRIRHELTEPGADRIWYIADAFRAGLSLDDIFELTNVDPWFLVQIQDLLNFETQVKDAG
MSGLNEIFLRQLKRKGFSDLRLSDLLGVNEAEVRKLRHKHAIHPVYKRVDTCAAEFSTDT
AYMYSTYEEECEANPSNRDKIMILGGGPNRIGQGIEFDYCCVHAALALREDGYETIMVNC
NPETVSTDYDTSDRLYFESVTLEDVLEIVRIEKPKGVIVQYGGQTPLKLARELEAAGVPI
IGTSPDAIDRAEDRERFQQAIHRLEMKQPENDTVTTVESAIISAERIGYPLVVRPSYVLG
GRAMEIVYDEQDLRRYFNEAVSVSNSSPVLLDRFLDNAIEIDIDAICDGETVVIGSIMEH
IEQAGVHSGDSGCSLPPYSLSEDVQNRMREQVGKLAIELGVIGLMNVQFAVKDDEIYMIE
VNPRAARTVPFVSKATGVPLAKIAARVMAGQSLKSQNFTKEVIPPFFSVKEVVLPFNKFP
GVDPMLGPEMRSTGEVMGVGDTFAEAYAKAQLGATASVPKSGRALLSVRDSDKQRVADLA
SNLIALGYEIDATHGTAIILGEAGINPRLVNKVHEGRPHILDRIKNGEYTYIVNTTEGRQ
AIEDSRQLRRGALRYKVDYTTTLNAAFATCMAHAADDRNTVTSIQELHKRIK
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtacagatattaaaagtattcttatcctgggtgcaggcccgattgttatc
ggtcaggcatgtgagtttgattactccggtgcccaggcgtgtaaagcgctacgtgaagag
ggttatcgagttattctggttaactctaacccagccactatcatgacagatcctgagatg
gccgatgcgacgtatatcgaaccaattcattgggaagttgtgcgtaatattattgccaaa
gagcgtcccgatgcgattctgcctaccatgggcggccagacggcgcttaactgtgcgctg
gagctggaaagcaagggcgtgctgaaagagtttaatgtcgagatgattggcgcgacagcc
gacgccatagacaaagccgaagaccgtggccgtttcgataaggcgatgaaagccattggc
ctcgagtgtccacgtgcgggttttgcccatacgatggcagaggcattcgcggtgcaggaa
actttgggtttcccgtgtattattcgcccgtctttcaccatgggtggcagcggcggcggt
attgcttataacatagaagaattcgaagagatctgtactcaaggactggacctgtcgcca
actagcgagctgctaatcgatgagtcgcttatcggttggaaagagtacgagatggaagtg
gtgcgtgacaagaatgataactgcatcatagtctgctctatcgagaacttcgatgccatg
ggcgtgcacaccggcgactcgatcactgtggctccagctcagacattgacggataaagaa
tatcagttgatgcgtaacgcttctattgcggttctgcgtgagatcggtgtggagacgggc
ggttctaacgtacagttcggcatcaatccgaaagatggccgtatggttatcatcgagatg
aacccaagagtatctcgctcttcagcattagcgtctaaggcgacgggcttcccgattgct
aaaatcgcggccaagctggcagttggttacactctagatgagcttaagaatgatatcaca
ggcggtgctacccctgcttcattcgagccagctatcgattatgtggttaccaagatgcca
cgtttcaacttcgagaagtttgccggtgcaaatgaccgtctaaccactcagatgaagtcg
gttggtgaagtgatgtccattggccgtacgttccaggaatcactgcaaaaagcattgcgt
ggactcgaagtcggtaagaatggcctagatccaattattgatatcgaaaatgccgatgcg
atgaaaagaattcgccacgagcttacagaacctggtgcagacagaatttggtatattgcc
gatgccttccgcgccggtctttctctcgatgatatcttcgagctgactaatgtcgaccct
tggttcctggtacagatacaagatttgcttaattttgaaactcaggttaaagacgctggc
atgtcgggtttgaatgagatcttcttgcgccaacttaagcgtaaaggcttctccgattta
cgtttgtcggacctgctcggtgtcaatgaggctgaagttcgcaagttacgtcataaacat
gcgattcatcctgtgtataagcgcgtcgatacttgcgccgccgagttctcaaccgatacc
gcctatatgtactctacttatgaagaagagtgtgaggcgaacccatctaatcgtgacaag
atcatgatcttaggcggcggaccaaacagaattggccagggtatcgagttcgattattgc
tgtgtccatgcggctctcgcattgcgtgaagacggttatgagaccatcatggtcaactgt
aaccctgaaaccgtatcaaccgattacgacacgtccgacagactctattttgaatctgtg
actctggaagatgtgctcgagattgttcgtatcgagaagcctaagggcgttattgtgcaa
tatggtggtcaaacaccgcttaagttagcccgtgaactcgaagctgccggtgtacctata
atcggtactagtcctgatgccatcgaccgcgccgaagacagagagcgtttccagcaggcg
attcatcgtctggagatgaaacagccagaaaatgataccgtgactacagtcgaaagtgcc
attatctcggccgagcgtatcggttatccgctagtcgttcgtccatcatacgtactcggt
ggtcgtgcgatggagatagtctacgatgagcaagatttacgtcgctacttcaatgaagcc
gtgagcgtatcaaactcctcccctgtattacttgaccgtttcttagataatgctatcgaa
atagatatcgatgccatctgtgatggtgagactgtggttattggctctatcatggaacat
atcgagcaagctggggtacattcaggggattcaggttgttcattgcctccttatagctta
agtgaagatgtgcagaaccgcatgcgtgagcaggtgggtaagctggccatagaacttggg
gttattggcttgatgaatgtgcagtttgccgtgaaagatgatgagatctatatgatcgaa
gttaaccctcgcgccgcacgtactgtaccattcgtttctaaggcgactggcgtaccttta
gctaagatagccgctcgtgtgatggcgggtcaaagccttaagtcgcaaaactttaccaag
gaagtgattccacctttcttctcggtgaaagaagttgttttgccgtttaacaagttcccg
ggtgtcgatcctatgcttggccctgagatgcgatctaccggtgaggtcatgggcgtaggt
gatactttcgccgaagcgtatgccaaggcgcaactgggtgccaccgcctccgtgcctaag
tccggtcgtgccttgctatcggttcgtgacagcgataagcaaagggtagctgacttggct
tcgaacctgattgctctcggatatgaaatcgatgcaactcatggtactgcaataatctta
ggcgaggcggggatcaatccacgtctggtcaacaaggtacatgaagggcgtccgcatatt
cttgaccgtatcaagaatggcgaatacacctatattgttaacaccaccgaaggtcgtcag
gcgattgaagattctcgccagcttcgacgcggtgcattacgatacaaggtggattacacc
acgaccttgaatgccgcatttgccacgtgtatggcacatgccgccgatgacagaaacaca
gtgacttcgatacaagagttgcataaacgcatcaagtaa
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