Shewanella psychropiezotolerans: FM037_06845
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Entry
FM037_06845 CDS
T07745
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsh03016
]
FM037_06845 (truB)
Enzymes [BR:
spsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FM037_06845 (truB)
Transfer RNA biogenesis [BR:
spsh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FM037_06845 (truB)
Prokaryotic type
FM037_06845 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDO82999
UniProt:
A0ABX5WVE8
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All DBs
Position
1539893..1540855
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AA seq
320 aa
AA seq
DB search
MGRRQRGRFIDGILLLDKETGMSSNFALQRVKRLFDANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGVRTDTSDSDGEVVQTRPLDFTQDLLIESLDYFRGETMQ
VPSMFSALKHKGQPLYKYAREGIEVPREARPITVFELNFISLEGDELTLDIHCSKGTYIR
TITDDLGEMLGCGAHVIMLRRTQVADYPYDRIVSLTQLNEMVEKAEAEGADPKAILDELL
LPMDTAVSKFQEINLADTVAPYLMNGNPVQNPGNCELADGELVRLTIGEEHKFVGIGSIN
DDGLLAPKRLIVLRDSLETT
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtcgtcagcgtggtcgcttcattgatgggatcttgctcttggataaagagaca
gggatgagctctaactttgccctgcaaagggtaaaacggcttttcgatgccaataaagcg
ggccatactggcgccttagatcccttagccacaggtatgttaccgatatgcctgggcgaa
gctaccaagttttctcagcaccttctcgatgcggataagcgctatctggtcacggctaaa
cttggtgtgcgaaccgatactagtgattctgacggtgaagtggtgcagactcgtcccctg
gattttacccaagacttattgattgagtctctggattatttccgtggagagactatgcag
gtgccttccatgttctcggcgctaaagcataagggacagcccctttataagtacgcccgt
gaaggcatcgaagtgcccagagaagccagacccatcacggtatttgagctaaactttatc
tctttagaaggcgatgagctgaccttagacatacattgttctaagggaacctacattcgt
accatcacagatgatctcggtgaaatgttgggatgcggcgcccacgtgataatgctcaga
cgtactcaagttgcagactacccttatgatcgcatcgtaagcttaactcagttaaatgaa
atggttgaaaaggctgaggccgaaggtgcagatcctaaagctattctggatgagttattg
ttgcccatggatacggcggtcagtaagtttcaagaaatcaacttagccgacactgttgca
ccttatctaatgaatggcaatccggtacagaatcctggaaattgtgagttagccgatgga
gaactcgtgcgcctcactataggtgaagagcataagtttgtcggtataggctcaattaat
gatgatggcttgctggcacctaagcgccttatcgtactgagagatagcttagaaaccact
taa
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