Shewanella psychropiezotolerans: FM037_06935
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Entry
FM037_06935 CDS
T07745
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_06935 (radA)
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FM037_06935 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
SLFN-g3_helicase
nSTAND3
Rad51
AAA_14
NPHP3_N
MMR_HSR1
cobW
RecA
AAA_18
CobU
AAA_11
ABC_tran
PDS5
DUF7125
AAA_19
AAA
AAA_16
NACHT
AAA_30
KAP_NTPase
AAA_24
RNA_helicase
TsaE
Zeta_toxin
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QDO83017
LinkDB
All DBs
Position
1563375..1564748
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AA seq
457 aa
AA seq
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MAKNKTAFVCNECGQDFPRWQGQCSACTEWNTITEVRLGSIKSAGSSVSGYAGAVGGGSK
KLNEIREVEAEKMLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTLLSDLISRMSQVMP
SLYCTAEESLSQFKNRVNRLKLSCNEDNLYLMAETSVEAIIAELDAKQIKFAVIDSIQAV
VTDLANGSPGSPSQVKSSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQIRTLRANKNRFGDVDTVGIFKMTERGMLSVDNPSEIFLSGSTTESPGAAITCI
RKGNRNLLLEIQCLTTETEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIFHDTYFNLVG
GLKIDESETCIDLALVTALLSSLNDFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEIYIPHRNYHKSMEGLGAKIHPVKTIHDFLELIN
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaaacagcatttgtatgtaatgaatgtgggcaggattttcctcgctgg
caggggcagtgtagcgcctgtaccgagtggaataccatcacagaggtacgcttagggtca
atcaagtcagcgggttcttctgtgtctggttatgcgggtgcggttggcggtggctctaag
aaactcaacgaaattagagaagtcgaagccgagaagatgctcactggcattggtgaacta
gaccgggtgctgtgtggtggtttaaccacaggctcagtgaatattatttcaggtgaccct
ggagcgggcaagacgactctgttatcagaccttatatctcgcatgtcccaagtgatgcca
tcgctatactgtaccgctgaagagtccttgtcacagtttaagaatcgtgtgaatcgtctt
aagttaagctgtaatgaagacaacttgtacctgatggctgaaacgagcgtcgaagccatc
attgccgagctcgatgctaagcagattaaatttgccgtcatcgactcgattcaggcggtc
gtcacagatctcgccaatgggagtccaggctccccctctcaagtgaagagcagtgctcag
gcgctgacccaatactgtaagcaaaataacgtcaccatgttcctcgtggcccacgtcaat
aaaaataatgaaactgccggcccacagacactgatccatatcgtggattgcctcactcat
ctcgagtgcaacgatggtcaaattcgtaccctcagagctaataagaaccgcttcggtgat
gtcgatactgttggtatcttcaagatgactgaacggggcatgctcagtgtcgataacccc
agcgagattttcctctcgggttcgacgactgaatctccaggagcggcgatcacctgtatt
cgcaagggtaaccgtaatttgttgctcgagatccagtgtttaaccacggaaactgaaggt
gagtttccgcagcgagtctgtgtcggcctcaatatgaaccgtattaagatgctgactggc
atactgcgtaagcatactcgaactaagatttttcatgatacctacttcaacttagtcggc
ggcttgaaaatagatgagtctgaaacttgtatcgacttggcattagtcaccgcattactc
agtagcttaaatgattttgtggtgcccagaaccacctgcatcatgggcgagctcagctta
aatggtgatgtgcgccccatagatagcggtgtacctagagtgaaagaagcggtgcagcat
ggttttaccgagatctatattccgcaccgcaactatcataagtcgatggaagggctaggg
gctaagattcatccggtgaagactatccatgattttcttgagttaataaattaa
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