Shewanella psychropiezotolerans: FM037_07290
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Entry
FM037_07290 CDS
T07745
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsh03009
]
FM037_07290
Enzymes [BR:
spsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
FM037_07290
Ribosome biogenesis [BR:
spsh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FM037_07290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Phage_TTP_11
Motif
Other DBs
NCBI-ProteinID:
QDO83072
LinkDB
All DBs
Position
1649004..1649720
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AA seq
238 aa
AA seq
DB search
MRLDKFLCKSTDFTRAESTDLIETGKVRVNGLVIVTPQTQVHENNNIMLAGQRLIARPSR
YIMLHKPINTLCSNVDGDYPSVMKYIHVDRAEDLHITGRLDADTTGLLLLTDDGRWSFNI
INPKYHCEKTYRVTLRDPIEDGGIDELVSRFEEGLQLQGEKSLTLPAKLEVIASHQVLLT
LCEGRYHQVKRMFFTVGNRVVGLHRLQVGKLILDIELGEWRYLTEDEVSGFNCYESVI
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgataaattcctctgcaagagtactgatttcacccgtgccgaatcaactgac
ttgattgagaccgggaaggtgcgggtgaacgggcttgttattgtcacgccccagacgcaa
gtacatgaaaacaacaacatcatgttagccggacagcgcctgattgccaggccttcgcgc
tatatcatgctgcataagccaatcaataccctttgttccaacgtcgatggcgactatccc
tcggtaatgaaatatatccacgtggacagggccgaggacctgcatatcacaggcaggctc
gatgccgatactacaggcctcttgctgctcactgatgatggacgttggtcgtttaacatc
atcaaccctaagtatcactgtgagaaaacttatcgggtgactctgcgagatcctatcgaa
gatgggggtatcgatgagctggtatccagattcgaagaaggactgcagctgcagggcgaa
aaatctctgacgctacccgctaaacttgaggttattgcgtcgcatcaggtactgctaact
ctttgtgagggacgctatcaccaggtaaaacgtatgttctttaccgtgggaaatcgtgtg
gtcggcttacatcgactgcaggtggggaaattgatcttagatatagaacttggtgagtgg
cgatacctgacagaagatgaagtcagtgggtttaattgctatgagtcggttatttga
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