Shewanella psychropiezotolerans: FM037_08030
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Entry
FM037_08030 CDS
T07745
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsh02000
]
FM037_08030
Transporters [BR:
spsh02000
]
Other transporters
Pores ion channels [TC:
1
]
FM037_08030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OMP_b-brl
OmpA
OprF
Motif
Other DBs
NCBI-ProteinID:
QDO83181
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All DBs
Position
1804027..1805073
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AA seq
348 aa
AA seq
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MQNFNKTLIGTLVIAAFSFGASAADVDNSWYLGAGLGQNNYQSVDATSHLQDDSDLAWNA
LVGYQLNKYFAIEAGWQDLGTDDDTHLWGGNTDGSEAIDVDGFTLGLVGTLPLDDKWFAT
GEIGAYQYHLAHEMGQGKYVSATDTAAYFGIGLGYNITDALAISAKYRRFSDVNETAWNT
VDMDAQTIGLQLTYRFGIESEPTPLAITETKPVVEPKVEPKIEPKYQTKIEKEEVTILFG
FDSSELSSSGKRQLDKIVRESKNSIDDSIVLIGQADNQGAADYNMKLSKQRVEAVANYLL
DSGLQVADMSKQAIGEKESRANSTQSRSLERVVVVELTSTKKILISSL
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattttaataaaactttgatcggtacactcgttattgcagctttctctttcggt
gctagcgctgcagatgtagacaattcttggtacctaggtgctggtctcggtcaaaacaac
tatcagtctgtagatgctacaagtcatctgcaagacgacagcgaccttgcatggaatgcc
ttggttggttatcagctaaacaaatattttgcgattgaggctggctggcaagatctaggt
accgatgacgatactcatctatggggtggtaacactgatggtagtgaagcaattgatgtt
gatggattcactttaggcttagtcggtacgcttcctttagatgataagtggtttgctaca
ggtgaaattggtgcttatcagtatcatttagcccatgaaatgggtcaggggaaatacgtt
agtgcaacagatactgctgcatacttcggtattggtcttggttataacatcactgatgca
ttagctatctcagctaaataccgtagattttcagatgtgaatgaaactgcatggaacaca
gttgatatggacgcgcagactataggtctccagctcacttatcgctttggtatagaatct
gagcctactccactagctataactgaaactaagcccgtggtagaacccaaagttgagcca
aaaatagaaccaaagtatcagactaaaatcgaaaaagaagaagtgactattctatttggt
tttgactcatctgagcttagttcaagcggaaaacgtcaattggataagattgtcagagag
tctaaaaattcaatcgatgactctatcgtgttaattggtcaggctgataatcaaggtgcg
gcagattataacatgaagctttctaagcaacgcgttgaagctgttgctaattaccttttg
gattcaggtctgcaagttgctgacatgagtaagcaagctatcggtgagaaagagtcacgc
gcaaatagcacacaatcacgttcactcgaacgagttgttgtagttgagcttacaagcaca
aaaaaaatattaattagttcactataa
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