KEGG   Shewanella psychropiezotolerans: FM037_09085
Entry
FM037_09085       CDS       T07745                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
spsh  Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:spsh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spsh02044]
    FM037_09085 (tssC)
Secretion system [BR:spsh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FM037_09085 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: QDO83353
UniProt: A0ABX5X044
LinkDB
Position
2035930..2037420
AA seq 496 aa
MSTEQQATTQAEVEVETVAQQSILERAISATAQTPADTTKELLSIMTSQVMEGTVTWNKN
LTLTIEQAVAEIDRKISEQLSAVMKNPSFQKLEGSWLGLHKMVKNSELGSDLKIKVVDYT
QEELLEQFEDATAIDRSRFFNMVYQEEFGTAGGLPYGVLLGDYEFGYADEDVALLRYMAE
VGSASHTPFIAAASSNMFDFDSFTTFTDGKPVASGFDSPAYASWNAFRASDDSRYVALTL
PKTMARLPYGQESTKVSSFAFEELPVRENGQQIVSSEDDFVWSNAAYEFGLLLTNAYSKY
GWCTAIRGAENGGKIENLPNFTYFTDAGDRVQQCPTQVNLTDEREKELSDLGFLPLLHYK
NTNYAVSMGAQSTHKPKTYADDDSNANAAISARLPYTMASSRIAQYLKVMGRDQVGSNLG
ADAIESHLNNWLQQYVNANAVGNESKAKFPLIEAQVTVEEHAGRPGAFSAIAHLRPWLQM
EELTSSIRMVANIPGS
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtccactgaacaacaagcaacgactcaagctgaagttgaggtagaaacagtagcacag
cagagtattcttgagcgtgctatttctgcgactgcgcaaacgccagctgataccaccaaa
gaactactgtctatcatgacatcacaagtgatggaagggactgtgacgtggaataagaat
ctcacgctaaccattgagcaggcggttgcagaaattgatcgtaaaatttctgaacagtta
tctgcagtgatgaaaaacccaagctttcaaaaattagaaggcagttggcttggtttacat
aaaatggttaaaaatagtgagcttggatcagatttaaaaattaaagtggttgattatacc
caagaagagttactagagcagtttgaagatgccacagccatcgatcgtagtcgcttcttt
aatatggtttatcaagaagaatttggtacagcaggtggtttgccatatggtgtgctttta
ggtgactatgaatttggttatgctgatgaagatgtagccttgcttcgttacatggctgag
gtgggatctgcatcacatacaccatttatcgcagctgccagttcaaatatgtttgatttt
gattcgtttaccacttttacagatggtaaacccgttgcgtctggctttgattcacctgct
tatgcgagttggaatgcatttagagcaagtgatgactcgcgctacgttgcattaactttg
ccaaagaccatggcacgcctaccttacggacaagaaagcactaaggtgtcatcttttgct
tttgaagagttaccagtacgagaaaatgggcagcaaatagtatcatctgaagatgatttt
gtttggagcaatgccgcttatgaatttggcttgttgttgacaaatgcctattcaaaatat
ggttggtgtactgcgatcagaggtgctgaaaatggcggtaaaatagagaatttacctaat
ttcacttattttactgatgcgggtgatagggttcagcaatgccctactcaggtcaatctg
actgatgagcgtgaaaaagaattgagtgaccttggctttttacccttattacattacaaa
aacaccaactatgcggtatcaatgggtgctcagtcgacgcataaacccaaaacctacgcc
gatgatgattccaatgccaatgctgctatttctgcacgcttaccttacaccatggcaagt
agccgtattgctcaatatttaaaagtaatgggtcgagatcaagttggctcaaatttgggt
gctgatgcgattgaatcccatctgaataattggctacagcagtatgtcaatgctaacgct
gtaggtaatgagtcgaaggcaaagttcccacttattgaggcacaagttacggttgaagag
catgccggtcgtccaggagcattttctgctatcgctcatttacgtccttggttacaaatg
gaagagctgacgagttcaattaggatggtggctaatattcctggtagttaa

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