Shewanella psychropiezotolerans: FM037_09735
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Entry
FM037_09735 CDS
T07745
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh02020
Two-component system
spsh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FM037_09735
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
FM037_09735
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
spsh02022
]
FM037_09735
02035 Bacterial motility proteins [BR:
spsh02035
]
FM037_09735
Two-component system [BR:
spsh02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
FM037_09735
Bacterial motility proteins [BR:
spsh02035
]
Flagellar system
Flagellar assembly proteins
Others
FM037_09735
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
AAA_16
Mg_chelatase
HTH_30
AAA
AAA_19
MerR
AAA_3
AAA_7
nSTAND3
HTH_11
HTH_24
MCM
ABC_tran
AAA_18
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QDO83462
LinkDB
All DBs
Position
2180244..2181605
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AA seq
453 aa
AA seq
DB search
MSEGKLLLVEDDHSLREALVDTLLLAQYECVDVCSAEDAIIKLKAESFDLVISDVQMQGI
GGIGLLNYLQQNQAQLPVLLMTAYATIDNAVNAIKLGAVDYLAKPFAPEVLLNQVSRYLK
PKIVQNMPIVADEKSLALLNLAKKVASSDASVMIMGPSGSGKEVLARYIHQHSSRDNGPF
IAINCAAIPENMLEATLFGYEKGAFTGAYQACPGKFEQAQGGTLLLDEITEMDLSLQAKL
LRVLQEREVERLGGRKSIKLDIRVLATSNRDLKAVVASGEFREDLYYRINVFPLTWPSLS
QRPADILPLARHLLARHGAKSGLSEIPSLDEAACRRLLTHRWPGNVRELDNVIQRALILM
TGELIVGSDIILDTQEVLISQEPVEQQLYSANKPVELDALGDELKAQEHVIILETLNMCQ
GSRKLVAEKLGISARTLRYKMAKMRDMGIEIPA
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaggtaaattattgctggttgaagacgatcattcactcagggaagcactggta
gacaccttgttgttggcgcaatatgaatgtgtcgatgtctgctcggccgaagatgcgatc
ataaaacttaaggctgaatctttcgacctcgtcatcagtgacgtacagatgcagggtata
ggcggcataggtttgcttaactaccttcagcagaatcaagctcagcttcctgtattattg
atgacagcttatgcaaccatagataatgcggtcaacgccataaagctcggtgcggtagat
tacttagctaaacccttcgcccccgaggtactgttgaaccaggtttctcggtatctgaaa
cctaagatagttcagaatatgccaattgtcgccgatgaaaagagccttgccttgctaaat
cttgccaaaaaggtggcttcatcggatgcttcggtgatgataatggggccgagcggttcg
ggtaaagaggtactggcccgatatattcaccaacatagcagtcgtgataatggccctttt
attgcgataaactgtgccgccatacccgaaaatatgctggaagccacgttatttggctat
gagaaaggagcctttactggtgcatatcaagcgtgcccaggtaagtttgaacaggcacag
ggaggcactttattactcgatgaaattaccgaaatggatttaagcctccaggctaaattg
ttgcgggtattgcaggaaagggaagttgaacggctcggagggcgtaaaagcataaaatta
gatatcagggtcctcgcaacctccaatcgtgatctaaaagcggttgttgcgtcaggggag
tttcgcgaagatctctattatcgaattaatgtctttccacttacttggccgtcattgagt
cagaggccggcagatattttgcctttggcccgtcatctcttggctcgccatggtgctaaa
tctggactatcggagatacccagtctggatgaagcagcttgtagacgattgctgacccat
agatggcctggcaatgtccgggagcttgataatgtcattcaacgcgctttgatcttgatg
acgggggaactgattgtggggtcagacattattctcgatactcaggaagttctcattagc
caagaacctgtagagcagcaattatactcagcgaataaacctgtagagctggatgcgtta
ggtgatgagcttaaggcacaggagcatgtgatcattcttgagacgctgaatatgtgtcaa
ggcagtaggaaattggtcgccgaaaagctgggtatcagtgccagaaccctcagatataag
atggcaaaaatgagagacatgggcatagagatacctgcgtag
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