Shewanella psychropiezotolerans: FM037_11190
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Entry
FM037_11190 CDS
T07745
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03030
DNA replication
spsh03430
Mismatch repair
spsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM037_11190
03430 Mismatch repair
FM037_11190
03440 Homologous recombination
FM037_11190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsh03032
]
FM037_11190
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_11190
Enzymes [BR:
spsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM037_11190
DNA replication proteins [BR:
spsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM037_11190
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM037_11190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
CAF1
DEDDh_C
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QDO83694
UniProt:
A0ABX5WX94
LinkDB
All DBs
Position
2515825..2516508
Genome browser
AA seq
227 aa
AA seq
DB search
MISLLLKSQLCWRAFRCRSEVMRQYHRELMAVISQDVSQSKLIALDLEMTGLDPNHDQIL
SIGLIPIENNLLLLDKAEQKLIKVDGGVGQSAAIHGILDKHLQDAIDIEEAISWFLEKTL
GKVLVAHHAPLDINFLQNAMSKTIGESVKLCAIDTLTVERRRLLRKHDVLKEGSLRLGAC
RTRYGLPVYAAHNALVDALACGELLLAQVAAIGQGEPLTVAELLAIK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgatctctctgctgctcaaatctcagttgtgttggcgtgcctttcgctgtcgctcggaa
gtgatgaggcagtatcatcgcgaattaatggccgtgataagccaagatgtcagccaatct
aagttaatagccctagatctggaaatgacaggtctagaccctaatcatgatcaaattctc
agtattggcttaattcccattgaaaataacttgctgctactcgataaggcggagcagaag
ctcatcaaagtcgacggcggcgtgggtcagagcgcggcgatccacggcatcttagataaa
catttgcaagatgcgatagacatagaggaagccatatcctggtttcttgaaaagacactc
ggtaaggtgctggtggctcatcatgcacctttagatatcaatttcctgcaaaacgccatg
agtaaaacaatcggagagtcagttaagctttgcgcgatagataccctgaccgttgagcgc
agacgtttactgagaaagcatgatgtattaaaagaggggtccctgaggctaggtgcgtgt
cgtactcggtatggtttacctgtgtacgccgctcataatgccttggtcgatgccttagca
tgtggtgagttattgcttgctcaggttgcagctattggccaaggagagccattaacggtt
gccgagttacttgcaattaaataa
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