Shewanella psychropiezotolerans: FM037_11910
Help
Entry
FM037_11910 CDS
T07745
Name
(GenBank) DEAD/DEAH box helicase
KO
K19789
DNA repair protein RadD
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_11910
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
FM037_11910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
AAA_30
ERCC3_RAD25_C
SLFN-g3_helicase
AAA_16
AAA
DUF7577
AAA_22
DZR
Zn_ribbon_3
T1R_D3-like
zf-tcix
Helicase_C_2
MgtE_N
Motif
Other DBs
NCBI-ProteinID:
QDO83811
UniProt:
A0ABX5X3J2
LinkDB
All DBs
Position
complement(2671434..2673176)
Genome browser
AA seq
580 aa
AA seq
DB search
MQLRDYQQQAIDSAVKHFKASPDSAVLVLPTGAGKSIVIAELARIANGRVLVLTHVKELV
AQNAEKVGILTTAAGIYSAGLNQKSTEDKTIVASIQSAVRAPEKFSTPFSLVIIDECHRI
SQDKDSQYQQLLIHLKSINPKIRLLGLTATPYRLDLGWIYRHHYHGKVGNPDKAVFEQCI
FELPMRPLIKRGYLSTPKIFDGLSAQYDFSFLKASTSGQYQEAEVNDLLSHCGRATTAIV
KQLVQIGSSRQGVIIFAATVRHAEEILKLLSKEQAALITGKTSTEQRDSLIEQFKARKIK
YLINVAVLTTGFDAPHVDLIAILRPTASVSLFQQMVGRGLRICEGKSECLIIDYAANGYD
LYFPEVGQNKPNSKSVPVQVHCPVCDFANIFWGLVDDDGDIIEHFGRRCQALIEQGGQKK
QCDFRFRSKVCPNCGEENDIAAKICHSCDAVLIDPDKRLKEVLQQKHHHLFKCDAMLFEE
DKDRLKIRYIDTDGNDFCQYFNFQTKAQIRAFYAIFVLSHTRTPGLKHPRYSKVQEVIAT
RDLFRKPDMLLLKKHKKGWDLQETFFDYQGRYQTENKFLQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
gtgcaattaagagactatcaacaacaagcgatcgactcggcggtaaaacacttcaaggca
agcccagactcagccgtactggtgttgcctactggagcgggtaaaagcatagtgattgcc
gagctggcccgtatcgccaatggcagagtcttggtcttaacccatgtcaaagagctcgtt
gcacaaaatgccgaaaaagtcggcatattgaccacggccgccgggatctactctgcaggc
ttgaatcaaaaatccaccgaagataaaaccatagtcgccagcattcaatctgcggtgaga
gcgccggagaagtttagcaccccattttctctggtgatcatagacgagtgtcacaggata
agtcaggataaagacagccaatatcaacagctgctaatacaccttaagagcatcaatccc
aaaatcaggctgctgggactcacagcaaccccctaccgactcgatctcggttggatctac
cgtcaccactatcatggtaaggtaggcaaccctgacaaggcggtatttgagcaatgcatc
ttcgaactccccatgcgccccttgataaaacgcggctacctgagcacacctaaaatattc
gatggcctcagtgcccaatatgatttcagcttccttaaagcctctactagcggccaatat
caagaagccgaagtcaatgacctactcagccattgcggccgggcaaccacggccatcgtt
aaacaactggtgcagataggcagcagcagacaaggcgtgatcatctttgccgccacagtc
cgtcacgccgaagagatactcaaactcttatctaaagagcaagcggcgctgatcacaggc
aagaccagcaccgagcagcgcgatagcctgattgagcagtttaaggccagaaagattaag
tacctgataaacgtcgccgtattaaccacaggcttcgatgcgccccatgtggatcttatc
gccattctacgcccgacagcttcggtgagcctgttccagcagatggtcggtcggggcttg
agaatctgcgagggaaaatctgagtgcctcatcattgactatgccgctaacggctacgat
ctctactttccggaagtgggtcaaaacaagccgaacagtaaatctgttccggtacaggta
cattgcccagtgtgcgatttcgctaatatcttctggggcctggtcgatgacgatggcgac
atcatcgagcacttcggtagacgctgtcaggcgttaatcgaacaaggtggccagaagaag
caatgtgatttcaggtttagatctaaagtctgcccaaactgcggtgaagaaaatgatatt
gccgctaagatctgtcatagctgcgatgccgtgctgatcgatcccgataaacgcctcaaa
gaggtactgcagcagaaacatcatcatctgtttaaatgtgacgccatgttattcgaagag
gataaggacagactaaaaatcagatacatagacaccgacggtaacgatttttgtcagtac
ttcaattttcaaaccaaagcgcagatccgcgctttctatgccatattcgtattgtcgcac
accagaacacctgggctaaagcatccaagatacagcaaggtacaagaagttattgcaacc
cgagacctgtttcgtaaaccagatatgttgctactcaaaaagcataaaaagggttgggat
ctgcaggaaaccttcttcgattatcaaggccgctaccaaactgagaataagtttcttcaa
tag
DBGET
integrated database retrieval system
