Shewanella psychropiezotolerans: FM037_12290
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Entry
FM037_12290 CDS
T07745
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spsh01002
]
FM037_12290
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
FM037_12290
Peptidases and inhibitors [BR:
spsh01002
]
Cysteine peptidases
Family C82
FM037_12290
Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FM037_12290
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
QDO83877
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Position
2767932..2769389
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AA seq
485 aa
AA seq
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MFTTGENSEIASVDHGGEFMFTRCSSAMVFAVLIILFCTRPLLAMDSSEAAFNSLLYQVQ
FVRLIKPSKQIEQDYRALTLGPMKLKQARVERIKSELQQFWASLGIPTNAMNMKSSENLF
QQVISLEPLSKDYLATSNKIRYLLWLDQKGDWSELASNSWLKLGDKHSLVPEISRRLKGL
GDLREYNPVSILFDANVKNGVRLFQQRHGLKLDGIIGPETLRWINIKPVKRAELLAINFI
NKTRYLASIEPSFLIINIPAFELELIDNGQVALQSRVIVGKPYRQTPLLSSRISNLVINP
SWRVPRRLLTRDLLPKVREDGGYIQDRNFNVFDRQGEMVSKTAQEWQDLAHGHFPYRLVQ
KPGEGNTLGRYKFYFENKYSVYLHDTADKELFEESNRALSSGCIRIENVEGLANWMASNL
VTDKQTWVDMQTERQKTQWFSLDQSLPVHLVYWTAWVDKWGAAQFRNDIYHRNSTLNLAS
ARASP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaactggtgaaaattcggagattgcatctgtcgatcatggaggtgaatttatg
tttacaaggtgttcgagtgcaatggtgttcgctgtcttaattattttgttctgtaccaga
ccactccttgctatggatagctcagaagccgcatttaattctttgctctatcaagttcaa
tttgtacgattaattaaaccatcaaagcaaattgaacaagattatagggcattaacctta
gggcccatgaagttaaaacaagccagagtcgagcggattaaatctgagctgcagcaattt
tgggcatccctagggatccctaccaatgcaatgaacatgaaaagctcggagaacttgttt
caacaggttatttccctggagccactctctaaggattatctagccacgagtaataagatc
cgctatttactctggctagatcaaaaaggggactggagtgaattagcctctaactcttgg
ttaaagctgggcgataaacatagcttagtacctgaaatcagtcgcagattaaaggggcta
ggcgatttgagagagtacaatccggtcagtatactgtttgatgctaatgttaaaaatggt
gttagactttttcaacagcgtcatggtttgaaattagatggcattattggccccgaaacg
cttcgctggatcaatattaaacccgtgaagcgggctgaattgttagcgattaactttata
aataagacccgttacttagcctcaattgaacctagttttttaattataaacattccagca
tttgaattagaacttatcgataatggtcaagtggcattgcagtctcgggtgatagtgggt
aaaccctatcgtcaaactccactattaagcagtcgaatttcaaacctggtgatcaatcca
agctggcgtgtccccaggcgtttattaactcgggatctcttgcctaaagtcagggaagat
ggcggttatattcaggatcgaaattttaatgttttcgatcgtcagggagaaatggtgagt
aaaaccgcgcaagagtggcaagatttagctcatggtcattttccctatcgtctcgttcaa
aagccaggagaaggcaataccttaggacgctataagttttattttgagaataaatacagt
gtctatctacacgatactgccgacaaggagttgtttgaagaatctaaccgtgcactttca
tccgggtgtatacgtattgaaaatgtcgagggactagccaactggatggcatctaatctg
gtaactgataaacagacttgggtcgatatgcagactgaacgacaaaagactcaatggttt
tctttagatcagagtctacccgttcatttggtttactggaccgcttgggtagacaagtgg
ggcgccgctcaatttagaaatgatatataccatagaaattcaacacttaacttagcatcg
gctcgtgcgtctccatga
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