Shewanella psychropiezotolerans: FM037_12690
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Entry
FM037_12690 CDS
T07745
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh00260
Glycine, serine and threonine metabolism
spsh00460
Cyanoamino acid metabolism
spsh00630
Glyoxylate and dicarboxylate metabolism
spsh00670
One carbon pool by folate
spsh00680
Methane metabolism
spsh01100
Metabolic pathways
spsh01110
Biosynthesis of secondary metabolites
spsh01120
Microbial metabolism in diverse environments
spsh01200
Carbon metabolism
spsh01230
Biosynthesis of amino acids
spsh01240
Biosynthesis of cofactors
spsh04981
Folate transport and metabolism
Module
spsh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FM037_12690
09102 Energy metabolism
00680 Methane metabolism
FM037_12690
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
FM037_12690
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
FM037_12690
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
FM037_12690
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
FM037_12690
Enzymes [BR:
spsh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
FM037_12690
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Helic-prim_T7_N
Motif
Other DBs
NCBI-ProteinID:
QDO83937
LinkDB
All DBs
Position
2862056..2863321
Genome browser
AA seq
421 aa
AA seq
DB search
MFNYSIKIKEFDAVVDKAIQKENVRQEAHIELIASENYASPMVMEAQGTSLTNKYAEGYP
GRRYYGGCEHVDEIEALAIERAKELFGADYANVQPHSGSQANAAVFMALVEPGDTVLGMS
LAHGGHLTHGSHVSFSGKSYNAVQYGINEAGEIDYDEVTALAHQHQPKMIIAGFSAYSQI
IDWARFRQIADEVGAYLFVDMAHVAGLVAADQYPNPLPHAHVVTSTTHKTLRGPRGGLIL
SLNHPELEKKLNSAVFPGVQGGPLMHVIAAKAVAFKEALLPEFAYYQAQVVRNADVMART
LIERGYDVVSGGTRNHLFLLSLIKQGLTGKEADAALGQASITVNKNAVPNDPQSPFVTSG
LRIGSPAITTRGFKEEECRQLSTWIADILDALQTEDVSTVIAEVKNKVSLLCGDYPVYRD
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgtttaattatagtattaagattaaagagttcgatgccgtggttgataaagccattcaa
aaagaaaatgtacgccaagaagcgcacatcgaacttattgcttctgaaaactatgccagt
ccaatggtgatggaagcacaaggaacatcactgacaaataaatatgccgaaggttaccct
ggacgtcgttattatggtggatgtgagcatgttgatgaaatagaagcattagccatcgag
cgggcgaaagaactctttggcgctgattatgccaacgtgcaaccgcattcaggttctcag
gccaatgccgcagtatttatggcattagttgaacccggagatacagtattaggcatgagt
ttggctcatggtgggcacttaacccatggttcccatgtgagcttttctggaaaatcttac
aatgcagttcagtacggtatcaatgaagctggcgaaattgattacgatgaagtgactgct
ttggctcaccaacatcagcccaaaatgatcattgccggattttcagcttactctcaaatc
atcgactgggctcgctttcgtcaaatagccgatgaagtcggggcctatctttttgtcgat
atggcccatgttgcaggccttgttgctgctgatcaatatccaaatcctttaccacatgct
catgtcgtcacatcaacaactcataaaaccctacgtgggcctcgtggtggcttaattctg
agcctaaatcatcctgagttagagaagaagctcaattcggccgtttttcctggtgttcaa
ggtgggcctttaatgcatgttattgcggctaaggctgtggcattcaaagaagcgttgctt
cctgaatttgcgtactatcaagctcaggttgttcgtaatgccgatgtgatggctcgcaca
ttgattgaacgtggctatgatgtggtttctggtggtacccgtaatcatttattccttctg
agtctcattaaacagggcctcacaggcaaagaggctgatgcggctctgggccaggcttca
attacggtaaataaaaatgcggtacctaatgatccccaatctccctttgttacttcagga
cttcgtattggttcacctgcaatcacaactcgaggttttaaagaagaagagtgtcgtcag
ttgtctacttggatagcggatatattggatgctctgcaaactgaagatgtcagtacagtg
atcgcagaggtgaagaataaagtaagcctgctttgtggtgactatccggtctaccgtgat
cagtga
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