KEGG   Shewanella psychropiezotolerans: FM037_14790
Entry
FM037_14790       CDS       T07745                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
spsh  Shewanella psychropiezotolerans
Pathway
spsh03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:spsh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    FM037_14790 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:spsh02044]
    FM037_14790 (tssM)
Secretion system [BR:spsh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   FM037_14790 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: QDO84268
UniProt: A0ABX5X2V6
LinkDB
Position
complement(3343982..3347545)
AA seq 1187 aa
MWSKLKSFFIKLLPEFKSALPILLVAIFVLINVGIWWAGPWLEIESEHVLASVGSRVVAS
TIFSLSCFALWGWFQWRKLNQYNADNEKVQQLKDDPIKGMVERQQVELNDVMSGLKESLN
TRNYLYALPWYLVLGVENAGKTSMINRSGQKFVFSSVMRASGKKSENPYSFDWWISDNAV
LIDPDGELLTQKKVEGSNEGEMTRRLWTHFVEWLESTRSRRPLNGVVLALDMANVISSAT
SERKAYAQLIRARLRELMETLSTRLPVYITLTKLDLLLGFEPFFRHYTQAQRDEIMGFTF
SLNSVNDLDSWLKEFDEDYSGFIARINAHLPRALLQCRDKEERAAIYSFTRQIAGSHQVL
QEFFSDALASDQFSTSALVRGVYFTSVYQQGVPTNAYVDSASRRYGLRESINSAQKSENS
TTYFIQSLFKQIIYPEAGLASDNFKVAKQKRRLMTLSFVACTIASVLLVGTWHRYYLLNG
EQADAVLNKVTEFNELNELSSFDLLGKSIIPPLNTIRAATLEFGFFRDKPRLISDFGLYQ
GHTIGPKVEETYLRLLSYRYLPALLKQVAIDMSDAPENSNEKLAILRVFRMMVDKSGRQD
EFVKAYFSKVWQKSYEGDRILQTQLMEHLDYALLHTDLQAMRLAGVIEAEDTLKSYDKLI
AKTQAELSTLPIEQRVYRQLRQSASAELGGALDLKLATGPAYELVFEERKEIKNHGDGMK
IPRLLSKQGFERYFMPKSDSVADLALIDSWVLGQSDTTDFSDADKIALRNKIINQYTLDY
KSSWRRALNDFELKDFRDINHGVMVIDNFAISNRPINRLLDTLTTNTELFPSMPDDASAR
SVIMESPRYQIAAKIDSDFTALNHLLKSEGKQPAYLDEVMGSIERLHAYLKSIQDAPDVG
KAALKAAQERLTLNDADPIYALERIATSLPKPVDAMVSKLASESWKVVLQSAIKHLEVRW
YNEVFQDFEQNLASRYPFNPQSKKQVSIDDFERFFGPKGTLNNFYNDQMKMFLEENFDAL
NQFSEGDSTLVRKEVLQSLEQAKRIQQAFFNPKGNLDVEFSLETLQMSPNKRRSVMNIDG
QFVEYTHGPHRGVALVWPNTLRDSAVSKLTLVPSKTDASPRSLVFEGPWAFFRLLDSARM
SGSSSTSIDYKFVVDKGDVTYRLRTRDNVNPFTSKLLSSFEIPKTLY
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgtggtcgaagctgaaatcattttttatcaagctattaccagagtttaaatcggcatta
cccattttattggtggccatttttgtgttgatcaatgtagggatctggtgggctggtcct
tggttggagatagaatccgagcatgtgctcgccagtgtcggttcccgagtggtggccagc
actatcttctcgctgtcgtgtttcgctctgtggggctggtttcaatggcgtaagttgaac
caatataacgcagataatgagaaggttcagcagcttaaagatgatcccatcaagggtatg
gtcgagcgccagcaagtcgagcttaatgatgtgatgtcagggctcaaagagagtctaaac
acccgtaactacctctacgccttaccttggtatttggtgcttggggtcgagaatgccggt
aaaaccagcatgataaaccgctcggggcagaaatttgtgttctcctctgtgatgcgggcc
tcgggcaagaagtctgaaaatccctactccttcgactggtggatcagtgacaatgccgtg
cttatcgaccctgacggcgagttgctgacgcagaagaaggtagaaggcagtaacgaaggc
gagatgacaaggcgtctgtggacccattttgtcgagtggctcgagagtacccgcagccgc
agacccctcaatggtgtggtgttagcgctggatatggctaacgttatcagctcggcaaca
tctgaacgtaaggcttatgctcagctgattcgagcccgtctgcgtgagttgatggagacc
ctgtctacacgtctgcctgtgtatatcaccttgactaaactagatttattacttggtttc
gagcccttctttcgccattacactcaggcccagagagatgagatcatggggtttaccttc
tcactcaattcggtcaacgatctggacagttggctcaaggagttcgatgaagactattcc
ggctttatcgcgcgcatcaatgcccatcttccccgggcgctgttgcagtgccgtgataag
gaagagcgcgcggccatctatagttttacccgtcagatagcgggttctcatcaggtgcta
caagagttcttcagcgatgcattggccagcgatcaattttctacctcggccctggttcgt
ggtgtctatttcacctcggtttatcaacaaggcgtgccaaccaatgcctatgtcgacagt
gcttcacgtcgatatggcctgagagagtcaatcaacagtgcccagaagagtgagaactcg
acgacttatttcatccagtcactgtttaaacagatcatctatcctgaggccggtctagca
tcggataacttcaaggtggcgaaacaaaaacgtcgtctgatgaccctctctttcgtggca
tgcacaatcgcctcggtgctcctcgtcggcacctggcacagatattacctgcttaacggt
gagcaggcggacgcggtattgaacaaggtgaccgaatttaatgaactcaatgagctctcg
agcttcgatctactgggtaagagcatcatacctcccttaaataccatacgtgcagcgacc
ttagagttcggcttctttcgtgataagccaagattgatctcagatttcggtctttatcag
ggccataccatagggcctaaagtagaggaaacctacctgaggctgttgtcataccgttac
ctgccggcattgctgaaacaagtggccatcgacatgtccgatgcccccgagaacagcaat
gaaaagctggcgatactcagggtgtttcgcatgatggtggacaagagcggtcgtcaggat
gaatttgttaaggcgtatttttctaaggtgtggcagaagtcctatgaaggggatcgcatc
ttacagactcagttgatggaacatctggattatgctttgttgcatacggatctgcaggcc
atgaggctagccggcgtcatagaggcggaagataccctgaaatcatacgataagctgatc
gctaagactcaggccgagttgagcaccttacccatagaacaaagggtttacaggcagctc
aggcaatcggcctcggcggaattaggcggcgcattggatcttaaactggccacgggaccg
gcctatgagctggtgtttgaagaacgtaaagagatcaaaaatcatggtgatgggatgaag
atcccccgtttgctcagtaagcaagggttcgagcgctactttatgcctaagtctgattcg
gtggcagatctggcgttgatagacagctgggtgctgggccagtccgataccacggatttc
agtgatgcagataagatagccctgagaaacaagatcatcaatcaatataccttagactac
aagtcatcctggcgcagggcgctcaatgatttcgagttgaaggattttcgggatatcaat
catggagtcatggtgattgataactttgccatcagcaatcgtcccattaatcgcctgctg
gatactttgaccactaacactgagctattcccctctatgccggacgatgccagtgctcgc
agtgtcatcatggaatctccccgttatcagatagcggcgaagatagacagtgactttacc
gccttgaaccatctactcaagagtgagggaaagcagcccgcttaccttgacgaggtaatg
gggtctattgagcgattgcacgcttatcttaaatcgattcaggatgctcccgatgtgggt
aaggctgcgctcaaggcggctcaggaacgcctgaccctcaacgatgccgatcccatctat
gctttagagcgtattgccaccagtttgcctaaacctgtagatgccatggtgagcaagctg
gccagtgagagctggaaagtcgtgctccaaagtgcaatcaagcatttagaggttcgctgg
tataacgaagtgttccaggattttgagcagaatctggcttcacgttatccatttaaccct
caatcgaaaaagcaggtctccatcgatgacttcgaacgcttcttcggccctaagggcaca
ttgaacaacttctataacgaccagatgaagatgtttctcgaagagaacttcgatgcgcta
aatcaattcagcgaaggtgattcgactctggtgcgcaaagaggtgttgcagtctctggag
caggctaagcgtatccagcaggccttcttcaatcccaagggtaacctggatgtggagttt
tctctggagacactacagatgagccccaacaaacgccgcagtgtgatgaatatagacggt
caatttgtcgagtacacccatggtccacatcgtggagtggcgctggtatggcccaatacg
ttacgggactcggcggtgagcaagctgactctggtgccgagtaagacagatgcttcgcct
cgatccctggtatttgaagggccctgggccttcttccgtctgctggacagtgccagaatg
tctggcagtagctctaccagtatcgattataagtttgtggtcgataagggcgatgtgacc
tatcgattgcgtacccgggataatgtgaatccatttacttctaagttactcagtagcttc
gagatccctaaaactttgtattaa

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