Shewanella psychropiezotolerans: FM037_15460
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Entry
FM037_15460 CDS
T07745
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FM037_15460 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_15460 (ruvB)
Enzymes [BR:
spsh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FM037_15460 (ruvB)
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FM037_15460 (ruvB)
RecFOR pathway proteins
FM037_15460 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_16
AAA_3
TIP49
AAA_22
AAA_14
Mg_chelatase
nSTAND3
AAA_24
Bac_DnaA
NTPase_1
AAA_17
AAA_18
Rad17
NB-ARC
AAA_25
RNA_helicase
DUF815
TsaE
IstB_IS21
AAA_11
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QDO84355
LinkDB
All DBs
Position
complement(3479301..3480320)
Genome browser
AA seq
339 aa
AA seq
DB search
MIEADRIIHAEPQGVEVYEEQIDRAMRPKLLDEYTGQDATRAQLKVFIQAAQNRGEALDH
MLIYGPPGLGKTTLALIVANEMGVNIKSTSGPVLEKAGDLAALLTNLESGDVLFIDEIHR
LSPVVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRARFGI
PLRLEFYNVKDLSTIVTRSAKVLDLPIDDEGSLEIARRSRGTPRIANRLLRRVRDYAEVK
HDGEINKRVADLALDMLDVDVEGFDYMDRKLLLAIIDKFMGGPVGLDNLAAAIGEERETI
EDVLEPFLIQQGFIQRTPRGRIATQRAYQHFNMIQPEKN
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgatcgtataattcatgcagagcctcaaggtgttgaggtgtatgaagag
cagatagatagagccatgcgtcctaaattactcgacgagtacacgggacaggatgcgact
cgcgctcaactcaaggtgtttattcaggcggcgcagaatcgcggtgaagcactggatcat
atgctcatctatggcccgccaggtttaggtaaaacgaccttggctctcatcgttgccaat
gagatgggcgttaatatcaagtcgacctcgggtcctgtgctcgaaaaagcgggtgattta
gcggcgcttctgaccaaccttgaatctggtgacgtgctatttatcgatgagatccatagg
ctcagtcctgtagttgaagagatcctttatcctgcgatggaagactatcagctggatatc
atgataggtgaggggccagcggctcggtcgattaaactcgatttaccaccatttaccctg
attggtgcaacgacacgggcgggagcgttaacgtcccccttacgggcgagatttggtatt
cccctgaggctcgagttttataatgttaaagatctcagcaccatagtgactcgctcggcc
aaagtactcgacctccctatcgacgatgaaggttcactggaaattgcgagacgctctcgc
gggacgcctcgtatcgctaaccgtttattgagacgtgtcagagattacgctgaggttaaa
catgacggtgagatcaataagcgagttgccgatctcgccttagatatgctggatgttgat
gtcgaaggtttcgattatatggacagaaaactcttgctggcgatcatagataaattcatg
ggcggtccggttggcctagataatttggccgctgctattggtgaggagcgggaaaccata
gaggatgtgctggagccttttcttattcaacaaggctttattcagagaacaccccgtgga
cgcattgccactcaacgtgcctatcagcactttaatatgattcagccagagaaaaactaa
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