Shewanella psychropiezotolerans: FM037_15665
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Entry
FM037_15665 CDS
T07745
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
FM037_15665
Enzymes [BR:
spsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FM037_15665
Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FM037_15665
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
Sda
Motif
Other DBs
NCBI-ProteinID:
QDO84388
UniProt:
A0ABX5X375
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Position
3525841..3527388
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AA seq
515 aa
AA seq
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MRIQNIVLAGSIVLLSGCQSFDQSASEEHSTQAIPILPMISPKEVIEPKVEVAEVTDVWQ
RIRLGLSFDVPDQKLVKQYRDWYIKHPQHLATVSERATPFLYLIVEEIEKRDLPIELALL
PIVESAFDPFAYSHGAASGLWQFTSPMAKHFGLQMNWWYDGRRDVPAATIAALDMLEYLY
KKTDGNWLYAIAAYNTGEGRVINAVKKNKRKGKPTDFWSLRLPTETQRYVPQLLALADVI
KNADKYGIELYPIDNQANIQVIDVGSQIDLALAAGFADMTTSELHKLNPGYNRWATAPNG
PHNLVLPVDKVANFKLAMADTQADDRLNWERYQIKSGDSLGLIAQRYRTTPSALRAVNDI
KGNTIIAGRHLLIPVAANDPEQYALSLAQRVKSKQNISRGSEKIDYIVKSGDSFWKIAKA
HKVKTAQLAKWNNMAPKDTLKIGQKLAIWTGSKNASSVTRKVNYTVRSGDSLARIASKFK
VSVNDLVRWNTLEKSKYIQPGQKLRLYVNMTNVRA
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatacaaaacattgtcctagcagggagtattgtgctgctttcaggctgtcagtca
ttcgaccagtcagcctctgaagaacacagtactcaagctatacccattctacctatgatc
tcgcctaaagaagtcattgaaccaaaagttgaagttgcagaagtcaccgatgtctggcaa
aggatccgtctgggtttatcattcgatgtgccagaccaaaagttagtcaagcaatatcgt
gactggtacatcaagcacccgcaacatctcgcgacagtatcggaacgtgccacccctttc
ctctatttgatcgtcgaagagattgagaagcgtgatctgcctatcgaactggcccttctt
cccatagtggagagtgcattcgatcctttcgcctattcacatggcgccgcatcaggctta
tggcagtttacttcccccatggcgaaacatttcggtctgcaaatgaattggtggtatgac
ggtcgcagagatgtacccgcagcaaccattgccgccttagacatgctcgagtacctgtat
aaaaagacggatggtaactggctttatgctatcgcggcatacaacacaggtgaaggacga
gtgataaacgccgttaagaagaataagcgcaaaggaaaacctaccgacttttggtcatta
cgtctgccgacagaaacacaacgctatgtccctcaacttctcgcgctggctgatgtcatc
aagaacgccgataaatacggcatagagctctacccgatagacaatcaagccaatatccaa
gtgatcgatgtgggtagtcagatagatctcgcactcgctgccggatttgccgatatgacc
acatccgaattacataagctcaaccctggatataaccgttgggcaacggcacccaatggc
cctcacaacttagtgttgcctgtagacaaggtggcaaatttcaaattagccatggcagat
acacaagcggatgacaggttgaactgggaacgctaccagatcaaatcaggtgatagttta
ggcctaatagcccagcgttatcgcacgacaccttcggcgcttcgtgctgtcaatgacatt
aaaggcaataccatcatagcagggcgtcatctactcatccctgttgcggcaaacgatcct
gaacaatacgcccttagcctagctcaaagagtgaagtcaaaacaaaatattagccgtggt
agcgaaaaaatcgactatatcgttaagtctggtgattcattttggaaaatagcaaaggct
cataaggttaagacggcgcagctggccaagtggaacaatatggcgccaaaagacacattg
aaaattggacaaaagttagcgatatggacaggcagtaaaaatgcctcttccgtcactcgc
aaggtgaattatacggtacgcagcggagactcactggcacgtatcgcttcaaaatttaaa
gtcagcgtcaacgacctggttcgttggaatacattagaaaaatctaaatacattcagcct
ggccaaaaattaaggctatatgtaaacatgacaaatgtcagagcctaa
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