Shewanella psychropiezotolerans: FM037_15710
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Entry
FM037_15710 CDS
T07745
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
FM037_15710
Enzymes [BR:
spsh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FM037_15710
Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FM037_15710
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
Carbpep_Y_N
Motif
Other DBs
NCBI-ProteinID:
QDO86702
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Position
3536471..3538390
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AA seq
639 aa
AA seq
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MASSVVNPAHASNYTAEQQTYLDARKALKNKQFSSYNKLRKQLDDYPLTVYLDFHSNING
ILTHKGSRASSEIDQFKDTPLFNTARYRYLMRTGSKRRWDDFLMVSPSRPNNIILQCYFY
RAKLASGDKDIAFKGAKSLWLYGKSRPEECDPLFQVWQKAGYRTQEMIWSRMFLSFNANQ
HGLLTYLSRKITGNQAEVTRLLSVYKDPRSLRHTKRFMGRAKINGEIVAAGLKKLARKDL
KQAVKLYMTYQKLDRFSDYQGRKLSRYFVKRAIIRQEERLKSFVDTMLPLLDSDDLVELR
LRWAIREADITSLIAYLPQLSEQKKAKSRWQYWLSRVDKITSNQATSAPSSDIVENPSSS
RLANLSKRRNFYGYAAAHELNGEYQLEHVDTVSDPALRQKIFDDKALARVIELLAIDKTI
DARSEWVQMLGRHSQAMQKEYAILALENKWYDLGVQASIQGKLWNDMTLRFPYAAEQAFV
TASKKQKVNIDELRAIARRESAFYPYATSGVGARGLMQLMPATAKETARKAGVKYKGTRS
LYVNEINIRLGSAYYASLLKRFNNNRVLATAAYNAGPHRVKRWLKKTNGELDVVAFIEAI
PFTETREYVQAVLSYRVIYQIKQGKKPELFSAKELDFKY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctagctcggttgttaacccagcccatgccagtaattacactgccgagcaacaaaca
tacttagatgcgcgaaaagcactcaaaaacaagcagttcagcagctacaataaattacgt
aagcaactcgatgactaccctctgaccgtctatctggactttcattccaatatcaatggc
attctgactcataagggtagcagagccagctctgagattgaccaatttaaagatactccc
ttatttaacacagctagatatcgctatttaatgagaacgggctccaaacggcgttgggat
gacttcttaatggtcagtccaagcagacccaacaacatcattttacagtgttatttctac
cgtgctaagttggcatcaggcgataaagatatcgcttttaaaggcgctaaatctctctgg
ctttatggaaagtcgaggccagaagagtgtgacccgctctttcaggtctggcaaaaagca
ggttatcgcactcaagagatgatctggtcacgtatgttcctcagttttaatgccaatcaa
cacggattactgacttatctgtccagaaagatcactggtaatcaagccgaagtaacgcga
ctcctgtctgtatataaagatccccgtagcctgagacacacgaaaagatttatggggcgg
gcaaaaattaatggcgagatcgtcgccgctggattaaagaaactggcgagaaaagatctc
aagcaagctgtaaagctctatatgacctaccaaaaactggacagatttagtgattatcaa
ggtagaaaactcagccgctattttgtcaaacgcgccatcatcagacaggaagagcgccta
aaatcattcgtcgataccatgttgccactactagacagtgatgatctggtggagttacga
ttgagatgggccatcagagaggctgacatcactagccttattgcctacttaccccagttg
agtgaacagaaaaaagctaaatccagatggcaatattggctgtctagggtcgataaaatc
acctcgaatcaagccacttcagcaccgagttcagatattgtcgaaaacccatctagcagc
agattagcgaacttgagcaagcgtagaaatttttatggctatgccgcggcacacgagctc
aatggtgagtatcaactcgagcacgttgataccgtcagtgacccggcacttagacagaaa
atcttcgatgataaagccttggctcgtgtgattgagctactggccatagataaaaccatt
gacgccagatctgaatgggtccaaatgctgggacgacacagccaagcaatgcaaaaagag
tatgcaatattggcattagagaataaatggtacgatctcggtgttcaagccagcatacaa
ggcaaactgtggaacgacatgacactgcgtttcccctatgcagccgagcaagccttcgtg
acagccagcaagaaacagaaggtcaatatcgatgagctcagggctatagccagaagagag
agtgctttttacccttacgcaacctctggggtcggcgccagaggcttgatgcagctcatg
ccagcaaccgcaaaagagacagccaggaaagctggagtcaaatacaagggcacacgtagc
ctgtacgtcaacgagataaacattcgtctcggcagtgcttactatgcttccctattaaag
cggttcaataataatcgtgtgttagccacagcagcttataatgctggtccccatagggtt
aagcgctggttaaagaaaaccaatggagaactcgatgttgtcgccttcatcgaagcaatc
cctttcaccgaaacccgtgagtatgtacaagcagtgcttagctatcgagtcatctaccaa
atcaaacaaggtaagaaacccgagttgttttcggctaaagagctcgattttaaatattag
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