Shewanella psychropiezotolerans: FM037_17870
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Entry
FM037_17870 CDS
T07745
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FM037_17870 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsh02000
]
FM037_17870 (msbA)
Enzymes [BR:
spsh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
FM037_17870 (msbA)
Transporters [BR:
spsh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FM037_17870 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
AAA_22
RsgA_GTPase
AAA_29
APS_kinase
DEAD
AAA_16
AAA_24
ABC_ATPase
AAA_23
AAA_15
NB-ARC
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QDO84739
UniProt:
A0ABX5X058
LinkDB
All DBs
Position
complement(4015449..4017269)
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AA seq
606 aa
AA seq
DB search
MTNSSNQEVWTVFKRLMGYIKPLKVVFGFAVLGLFMYAAVDATFIAVIKPFIDGGFGGQV
SQVTSSSGVANIDLGTSDGFGASSDVLMMAPIVVIVLFSLRGLANFLSTYCISFMSARLI
MDLRQEVFEHYLTLPVSYIDRENSGNLISRVTYDTEQIARATGSALITIVRDSITVVGML
AIMFFYSWKLSLCIFVIGPIIGLIISIVSKRFRKVSKRIQAAMGGVTAATEQMIKGHKNV
LAFGGQEAESERFALVNEQNRYQNMKLALAQSISQPLVMVIGSFALAFVLYAASFEGMQE
ELTAGTFATILGAMLAMLQPIKSLTRVNAEFQRGIAACTTVFELLDTKSEVDNGTYQVER
VKGELRFNQVSFRYPTQEKLALNKIDFSVKQGQTIALVGRSGSGKSTIASLITRFYTGLE
EGSIELDGVNIDDFGLKSLRSQVALVSQQVTLFNDTIGNNIAYAYPGEVTQEQIIEAATL
AHAMEFIELLPEGLDTQVGENGVLLSGGQRQRIAIARAILRNSPVLILDEATSALDTESE
KAIQLGLDNLRHNRTSIVIAHRLSTIESADQILVIDQGVVVERGDHLSLLAQDGVYANLY
KMQFSS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacaaactcttcaaatcaagaagtctggaccgtatttaagcgcttaatgggctatatt
aagccattgaaagtcgtgtttggcttcgctgttcttggcttgttcatgtacgccgcagta
gatgccacctttatcgccgtgattaaaccctttatcgatggcggcttcggtggtcaggta
agtcaggtcacttcatcatcgggtgttgccaatattgatctgggtacaagtgatggtttt
ggcgcatcgagtgatgtgctgatgatggcacccatcgtcgtcatcgtactgtttagccta
cgtggcttggcaaatttcctgtctacttattgcatctctttcatgagtgcacgcctcatc
atggatctgcgtcaagaggtgttcgagcattacctcacccttcctgtgagttacattgat
agggaaaactcaggtaatctcatctcccgagttacctatgataccgagcagatagctcgt
gctacaggtagcgcgctgatcaccatagtcagagacagcatcactgtggtcggcatgctt
gctatcatgttcttctattcctggaagctatctctttgtatctttgtcatcggccctatc
ataggtttgatcatctccatcgtcagtaaacgttttcgtaaggtgtctaaacgaatacaa
gccgcgatgggcggtgtgaccgcggcaactgagcagatgatcaaaggtcataaaaatgta
ttggcatttggcggacaggaagccgaatctgagcgtttcgctctggttaatgagcaaaac
cgataccaaaatatgaaactggctctggcgcaatctatcagccagccactggttatggtg
attggctcttttgctctggcctttgttctgtatgctgcaagtttcgaggggatgcaagag
gagctaacggcgggaacattcgccacgattctcggtgccatgctggccatgttacagccg
atcaagagtctgacgcgcgtcaatgccgagtttcagcgaggtattgccgcctgtaccaca
gtgtttgaactcttagatactaaatccgaagtcgacaatggcacctatcaagtcgagcgc
gtcaaaggtgagcttagatttaatcaggtgagctttcgctaccccactcaagagaagctt
gcgctgaataaaatcgacttttctgtcaagcagggccagaccatagccttagtcgggcgc
tccggttcgggtaagtcgacgatagcgagtctgatcacccgtttctatactggcctcgaa
gagggaagtatagagcttgatggtgttaacatcgatgacttcgggctcaagagtcttcgc
agtcaagttgccttggtttcgcagcaggtgaccctgtttaacgataccatagggaataac
atcgcctatgcctacccaggggaagtgacacaagagcagataattgaggcggcaaccttg
gcacacgccatggagtttatcgagttgctgccagaagggctcgatactcaagtgggcgag
aatggtgtcttgctctctggtggtcagagacaaagaattgccatcgctcgggctatcttg
cgtaactcaccggtactcatactcgatgaggcaacgtcggccctggataccgagtcagag
aaagccattcaattgggactggataacttgcgtcataaccgaacctcgatagtgattgct
cacagactgtcgactatcgaatctgcggatcaaattttagtgatagatcaaggtgtggta
gtagagcggggcgatcatctgtctctgctagctcaagatggcgtatacgcgaacttgtat
aaaatgcagtttagcagttaa
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