Shewanella psychropiezotolerans: FM037_18000
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Entry
FM037_18000 CDS
T07745
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03030
DNA replication
spsh03430
Mismatch repair
spsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FM037_18000
03430 Mismatch repair
FM037_18000
03440 Homologous recombination
FM037_18000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spsh03032
]
FM037_18000
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_18000
Enzymes [BR:
spsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FM037_18000
DNA replication proteins [BR:
spsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FM037_18000
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FM037_18000
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_16
AAA_5
DUF3384
ResIII
AAA_14
AAA_2
TsaE
AAA_assoc_2
PIF1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QDO84763
UniProt:
A0ABX5X4B2
LinkDB
All DBs
Position
complement(4051841..4054618)
Genome browser
AA seq
925 aa
AA seq
DB search
MSYQVLARKWRPATFEQMVGQSHVLLALTNALTQQRLHHAYLFSGTRGVGKTSLARLFAK
GLNCEQGITASPCGQCSSCVEIAEGRFVDLIEVDAASRTKVDDTRELLDNVQYRPSRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQRLPVTVLSRCLQFNLKSLTQ
DEISSQLSHVLTLEQLTFDQAALTLLAKAANGSMRDALSLTDQAIAFGAGSVQLTQVQTM
LGSIDEKHVLSLLNALVQGDIENLMRVIGQILSFGADPQEVLRSLLELLHQITLSQFAPA
AAQLSIYSEQIKAFAQQLSPEQVQLYYQLLLTGRKDLPHAPDPKSGLEMALLRAVSFVPE
TPVTRWVVDKPAKVAIPEMVKTETGLVNPEQLEAKDQLVSHVSQENSNSQLAEVKKESVS
EPVSKPKAAVTPQAEQDDETDDLLALNSEQALILSQASSQGMEQSSLNTADQSFEKAVEL
SAAPMNETSADVIESAPAATSKAVTSPASAEPDNQAETTCLDDGEAETLSPPEKDPSEVN
SLSTNQSNLSQPQLSPEQLAQDAAFDAQYGFQQDEQEQGDYQAFDSLPAADYAQPQLDVG
SEMIAQGTDSQAGTELEDDILDAVLAARDSLLTDLAKTPEESAGKKPEAQRKDFAPPKRK
PQADNDDEAPSSLDGQAILEVKSELQSEAKPERRPQPVLATGIEDRPPWEEPVEAAATEN
VTSSGGNEQGTDTHPMVSTQVEAPVPVQEQVQSGIQAQSCDPLPPLGEAEVTGHEVDLKW
YRLMSAIDVGGRVRQLAVNSVCHEFTEPLSLLLKPIQKHLAADIAIVQLEEALGKALGAE
SKVSISVGVDGDRETPLEVRQRFHREIQAQAHQGLLTDTNVQWLMSQMGAELENDSLSYA
PELLSLKGNTIELIDKSNFKALPQS
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcaggtgttggccagaaaatggcgccctgccacatttgaacaaatggttggt
cagtctcacgttttacttgcattaaccaatgcgctcactcagcaaagattgcatcatgct
tacctgttttccggcactcgaggtgtgggtaaaaccagtttagctcggctattcgctaaa
gggttaaattgtgaacagggaatcacagcctctccatgtggtcaatgttccagctgtgtt
gaaattgccgaagggcgttttgtcgatcttatcgaagtcgatgcggcttcgcgaactaaa
gtcgatgataccagggaactgctcgataatgtgcagtaccgccctagccgaggccgattc
aaggtgtaccttatcgatgaggtgcacatgttatcgcgcagcagtttcaatgctttgttg
aagacgcttgaagagccacctgagcatgtaaagtttctgctggcgaccactgatcctcag
cgtctgcctgtgacggtactgtctcgttgtctgcaatttaacttaaaaagcctgactcag
gatgaaatttcatcgcaactgtcccatgtgcttactctggagcagctcaccttcgatcaa
gctgcattgaccctgttggctaaagcggccaatggcagcatgcgtgatgcactgagtctt
acggaccaggcgatcgctttcggtgcaggttctgtgcagctgactcaggtacagacgatg
cttggcagtatcgatgagaaacatgtactttccttgcttaacgccttggtccaaggtgat
atcgagaacttgatgcgggtaatcggccagattttatcctttggcgccgaccctcaggaa
gtgctcagaagcctactggaattattacatcaaataaccttaagtcagttcgcccccgca
gcggctcaactttccatttatagtgagcagattaaggctttcgcacagcagctcagtccc
gaacaagtacaactctattatcagttgttactgacggggagaaaagatctcccccatgcg
ccagatcctaaatcaggattagagatggcgctgcttagggccgtctccttcgtgcctgaa
acgccggtgacccgttgggtcgtagataagcctgctaaagtggccatacccgaaatggta
aagacagaaaccggactggttaatcccgaacagctggaagctaaagaccagcttgtgagt
catgttagccaagagaattcaaatagccagttagcagaagttaaaaaagagtccgtctct
gagcctgtttctaagcctaaggccgcagtaactcctcaagctgagcaagatgatgaaacc
gatgatttacttgcgcttaatagcgagcaagccctcattttaagtcaggcatcgagccag
gggatggagcagagcagccttaacactgccgatcaaagctttgagaaagctgtagagcta
agtgctgcacctatgaatgagacatcggcagatgtcattgagtccgctcctgctgcgact
agcaaagccgtgactagcccggctagtgccgagcccgataaccaagccgagacgacttgc
ttagacgatggcgaagcagaaacgctaagtccgcctgagaaagaccctagtgaggtaaat
tcacttagcaccaaccagtctaatttatctcagcctcagttgagccctgagcagctagcc
caagatgcagccttcgatgctcaatatggttttcaacaagatgaacaagagcagggggat
taccaggcttttgacagtctaccggcagccgactacgcacagcctcagttagatgtaggc
tctgagatgattgctcaagggacagattctcaagctggaactgagttggaagacgatatc
ttagacgccgtcttggcggcgcgagattcattgctcaccgatctggcaaaaacgcctgag
gagagtgctggaaaaaagcctgaagcccagcgcaaggactttgcccctcctaagcgcaaa
ccccaagccgataatgacgatgaagcaccgtcttcgttagacggtcaggctatattagaa
gttaaatcagagcttcagtcagaagctaaacctgaacgtcggccacagcctgttttagcc
acaggcattgaagacaggcctccctgggaggaacctgtcgaagccgcagctactgagaat
gtcacctcttcaggtggcaatgagcaaggcacagatactcatccaatggtatcgactcaa
gtagaagcgcctgtacctgtacaagagcaagttcaaagcggaatacaagctcagtcatgt
gatccgcttccccctctgggtgaagcggaggtgacaggccatgaggtcgatctcaagtgg
tatcgattgatgtctgctatcgatgtcggcggaagggtgcgtcaattagcggtgaactca
gtatgtcatgagtttaccgagcccttgtctctgttattaaaacctatccagaagcacttg
gccgcagatattgccattgtgcagttagaggaagccttaggcaaagcgttaggcgccgag
agtaaggtcagcatatctgttggagttgatggcgacagagagacaccactggaagtgcga
cagcgttttcatcgggagatccaagctcaggcgcaccaaggcttgttaaccgacaccaat
gttcaatggctaatgagccagatgggagcagagcttgaaaacgatagtttaagttatgca
cctgagctattgagtttaaaaggaaataccattgagctcatcgataagtcgaactttaag
gcgttacctcagtcataa
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