Shewanella psychropiezotolerans: FM037_18415
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Entry
FM037_18415 CDS
T07745
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsh03016
]
FM037_18415 (truA)
Enzymes [BR:
spsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FM037_18415 (truA)
Transfer RNA biogenesis [BR:
spsh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FM037_18415 (truA)
Prokaryotic type
FM037_18415 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
WVELL
Motif
Other DBs
NCBI-ProteinID:
QDO84831
LinkDB
All DBs
Position
complement(4146539..4147324)
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AA seq
261 aa
AA seq
DB search
MRVALGIEYDGSKYYGWQRQLEVDTVQAQLERALSKVANQPITVHCAGRTDSGVHGTGQV
VHFETTAIRKESAWTLGVNVNLPDDIAVKWVKLVDEDFHARFSATARRYRYIIYNYHLRP
GILRSGVSHYRGQLDENKMHHAAQHFVGEHDFTSFRALHCQSKTPFRHVHEVNVTRQGMY
LCVDIKANAFLHHMVRNIVGSLIEIGLGHQNEDWIVDLLALKDRSKAAPTAKPNGLYMVD
VTYPVKYELPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtagcgttaggtatcgaatatgatggcagcaagtattatggctggcagcgtcag
ctcgaagttgacacggtccaggctcaattagagcgagccctgtcaaaagtagccaatcaa
cccattaccgttcactgcgcgggtagaaccgactcaggcgttcatggtacgggacaagtg
gttcacttcgagactacggctattcgtaaagagagtgcctggaccttaggcgtgaatgtg
aacttgcccgatgacatcgcggtcaaatgggtgaagctggtcgatgaagattttcatgct
cgcttctccgcgacggccagacgttatcgttacatcatctataactatcatttaagaccc
gggatcttacgttcgggtgtgagtcattatcgcggtcaactcgacgagaacaagatgcat
catgcggcgcagcattttgtcggtgagcatgactttaccagtttcagagcgctgcactgt
cagtctaaaaccccgtttcgacatgtccatgaggtcaatgtgacccgccagggcatgtac
ttatgtgtggatatcaaggcgaatgccttcttgcatcatatggtgcgaaatatcgtaggt
tcattgattgaaattggtttaggtcatcagaatgaagactggattgtcgacctgttagcg
ctcaaggacagaagcaaggcggcccccacggcgaagccgaatgggctctatatggttgat
gtgacctatccggttaaatatgaactgccaaaattagcactcggtccgctatttatgttg
gattga
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