Shewanella psychropiezotolerans: FM037_18750
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Entry
FM037_18750 CDS
T07745
Name
(GenBank) outer membrane beta-barrel protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spsh02000
]
FM037_18750
Transporters [BR:
spsh02000
]
Other transporters
Pores ion channels [TC:
1
]
FM037_18750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA_membrane
OmpA
OMP_b-brl
MipA
Motif
Other DBs
NCBI-ProteinID:
QDO84883
LinkDB
All DBs
Position
complement(4250802..4251899)
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AA seq
365 aa
AA seq
DB search
MYSLKRTSSLVQISALSLLASSSFFVMADDMTQANEVKSNDPLTVQDDSFFYLGAKGGWV
NYQNACEAQAVDCDANDSAWGGFAGYQFHRNWGVETGYNDFGQASAVYPESGLFNEYIGT
MKGWEFSLKGNLPLTENLDLFGKAGTLRWDGNNTGPFSYNSDNGWSPMVGIGLEYKFTPS
WVARVEYQYFDSVGSDLLGGSNIHFTSLGLSYRFGQTKSMAKPVTQPAPVAVEQVVIAPS
PIVIAAVIQAVHFDFDSQVPLQTHILVEVAEHLNQYPSSSVVLQGYTDAVGTSDYNLKLS
KRRAESVASYLKELGVRDIQISIEALGETHPEIDNMTEAHRANNRRVYITIPEITVSQDS
DESAL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgtattcgttgaagcgcacttcctctcttgttcaaatatcggccttgtcacttctggca
agcagttcattttttgtcatggcagacgacatgactcaagctaacgaggttaaaagcaac
gaccccctaacagtacaggatgacagcttcttctatcttggtgccaaaggcggctgggtt
aattatcaaaatgcctgcgaagctcaagctgtcgattgcgatgccaacgattctgcctgg
ggcgggtttgcgggttatcaatttcaccgcaattggggcgttgaaaccggttacaatgat
tttggtcaagcgtcggcagtttaccctgagagtggactgtttaacgagtatataggcacc
atgaaaggctgggagttttcattgaagggcaatctgccactcaccgaaaacctggacctg
tttggcaaagcgggtacattgagatgggatggtaacaacacaggcccattttcatataac
agtgacaatggctggtctcccatggtcggcatcggtttggaatacaagttcaccccgtct
tgggttgcgcgtgttgagtatcaatatttcgactcggttggcagcgatctgcttgggggg
agtaatatccacttcaccagtttagggctcagctatcgtttcggtcagactaagtcaatg
gctaagcctgtgactcagcctgcgccagttgcagtggagcaagttgtcatagcaccaagc
ccaattgtcatcgccgcagtgattcaagcggtacatttcgatttcgatagtcaagtgcct
ttgcagacgcatatcttggttgaagttgccgagcatttgaatcaatacccaagctcgtct
gtggtgcttcaaggctacaccgatgctgttggcacttcagactataaccttaagctatca
aaacgacgtgccgagtccgtcgccagttacctcaaagagctaggggtgagagatatacag
attagcatcgaggctttaggtgagacccatcccgagatcgataacatgaccgaagcgcac
agagccaataaccgccgggtatatatcaccatcccggagataacagtgagccaggacagc
gatgagtcggctctatga
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