Shewanella psychropiezotolerans: FM037_18775
Help
Entry
FM037_18775 CDS
T07745
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_18775
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FM037_18775
Archaeal homologous recombinant proteins
FM037_18775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_ATPase
GAS
nSTAND3
MCD_N
AAA_21
GTP_EFTU
ABC_tran
AAA_16
cobW
Motif
Other DBs
NCBI-ProteinID:
QDO84887
LinkDB
All DBs
Position
complement(4256639..4259695)
Genome browser
AA seq
1018 aa
AA seq
DB search
MRPLKLVMSAFGPFASTQETDFSALGTNPLFLINGPTGAGKTTLLDAICFALYGKTTGDE
REGSQMRCDLAVDSLLTEVTFSFALSDIQYRIRRVPEQQRAKKNGDGYTVQKPEAQLYRI
DSDCSEHLLVASKVSEATAEIEQLTGLDADQFRQVMVLPQGKFRELLMADSKDREKIFSQ
LFQTQIYRKIEDKLKFQASAIKAEVRDHRNRRDGILHNIELESDEALNAELAEFSPKLTQ
AVESKEKASLVFIDANKQFESAKLLTNDFDALEKLQQSAAVLDEQNQAIEQDRARLESGQ
KAQQLKPVLDVSLSREKEVAQAQDSLARIQSAKQSSEQALALSKTKFDSLAELDVELQRA
QNEAQKLIQLEPQLQGLDGLQKSFSQATGERDQAKEKGIKEKGVLEVLAAEKYAAEQRIS
QLEQGASEQVNAQQAVTVQNDLIERYLQWQKASIESSHTEQALKQAKEKGQQLKSRFSEA
QTSHRQLQLIWHRGQAASLALQLSPGLPCLVCGSVEHPNPAQSEEQLPTEEELQQAQRIE
ELANEALNQARADYSGLNTQYQVQLKQLDELQQRIGDSCTQPIESLQSQLQELQQQLTKA
NTAAQQLIQLRKQIQNWQSKERDLQTELDAEREHFQKLQNLVSSLKGQVEQASAAIPDQY
RSLDVLKNAIRQANAHVTALHQSINTIRQSHTQALEQDAAQSAALASALSNSAQARELSH
EAHAELSSQLSSSGFSDKQALTHALLSSEVLKDIADGIANYQQACIANQTTLTQFSEKLD
GQVRPQLIDVEERVATSQAELQAAEHSWQLIQSRVTQLVQTQKQLNDADSQAKKLEDEYA
VIGTLSEVANGQTGNKISLQRFVLSVLLDDVLLEASHRLQMMSKGRYRLIRKEERAKGNK
ASGLELEVEDAYTSKVRPVATLSGGESFMAALSMALGLSEVVQAYAGGIKLDTLFIDEGF
GSLDQDSLDLAIRTLMDLQSSGRMIGVISHVSEMKEQIGTRIDIIKTAQGSETVIVLP
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaggccattaaaactggtgatgtcggcctttggccccttcgcgtcgacccaggaaacc
gatttttcggcgctgggcaccaatccattatttttgatcaacggaccaactggcgcgggt
aaaaccacgcttttagatgccatctgtttcgctctatacggtaagaccacaggtgatgag
cgtgaaggcagtcagatgcgctgcgacttagccgttgacagtctactcaccgaggtgact
tttagttttgccctgagtgatattcaataccgcatccgccgtgtacccgaacagcaacgc
gccaagaaaaatggtgatggttacacggtgcagaaacctgaggctcagctttaccgtatc
gatagtgactgtagcgagcatctgttggtggcgagtaaggtctctgaggctaccgctgaa
attgagcaactcacaggtctggatgccgaccagttccgtcaagtcatggtgctgccccag
ggtaagttccgcgaactcctgatggcagactctaaagacagagagaagatattcagtcag
ctgtttcagactcaaatttatcgtaagattgaagataaactcaagtttcaggcttctgca
attaaagctgaggttcgggatcaccgcaacagacgcgatgggatcttacacaatatcgag
cttgagtcagatgaagcgttaaacgctgagcttgccgagttttcacctaaactaactcaa
gccgttgagagtaaagagaaggcgagccttgtctttattgatgccaataagcagtttgag
tctgccaagttactgaccaatgatttcgatgctctggaaaaattgcaacagtcagctgca
gtattagatgagcaaaatcaggcgatagagcaagacagagcaaggctagaaagcggtcaa
aaggcgcagcaattaaaaccagtgttagatgtttcactgtctcgtgaaaaagaagtcgct
caagctcaagatagcctggctcgaattcaatctgctaagcagagcagtgagcaggcactg
gccttaagcaaaaccaagtttgactcattggctgagttggatgtggaactgcaacgagca
cagaatgaagcgcaaaagttaattcaattggagcctcagcttcaaggattagatggtcta
caaaaatcgttcagtcaggcaacaggtgaacgtgatcaagccaaagaaaaaggtattaaa
gagaagggagtattagaagttctagcagctgaaaaatatgccgcagagcaacgaatctct
cagttagagcaaggtgctagtgagcaggttaatgcccagcaagctgtcactgttcaaaac
gacttgattgagcgttatctgcagtggcaaaaggcgagtatcgaatctagtcatactgaa
caggccttgaaacaggcaaaagagaaaggtcaacaactcaagtctcgttttagcgaagcg
caaacgagccaccgacaactgcagctgatttggcatcgtgggcaagcagcaagtttagca
ttgcagcttagtcctgggctgccgtgtctggtatgtggtagcgttgaacatcccaatccc
gctcaaagtgaggagcaactgccaactgaagaggagctgcaacaggctcagcgaattgaa
gaattggcaaatgaagcccttaaccaagctagagccgattactcaggcttaaacactcaa
tatcaagtgcagttgaagcaattagatgaacttcagcaaagaattggcgacagctgtact
caacccattgaaagtttgcagtcacaattgcaggagttacagcagcagcttactaaagcc
aatactgccgctcagcaattaattcagctaaggaagcaaatacaaaactggcaatcgaag
gagagggatctgcaaacggagctcgatgctgaacgagagcattttcaaaagctgcagaat
ctcgtatcgagtcttaaaggacaagtggagcaagcatcagccgctatacctgatcaatat
cgtagcctagatgtactcaaaaatgcgattcgccaagctaatgcccatgttacggcgcta
caccaaagcataaacaccatacgccagtctcatacacaagcactggagcaagatgcggca
cagtctgcagctttagccagtgctctgtcgaacagtgctcaggcaagggagttaagtcat
gaggctcatgcggagctaagtagccaattatcgagttcaggttttagtgataagcaggca
ttgacccatgctttgttatccagtgaagtccttaaagatatagccgatggaatcgctaac
tatcagcaggcttgtattgccaatcagacgaccctaactcagttcagtgagaagcttgac
gggcaagtaaggcctcaattaatcgatgttgaggagcgggtggcgacgagtcaggcagag
ctgcaagcggctgagcatagttggcaactcattcagagcagagtcacacaattggttcag
actcaaaagcagctaaacgacgccgattctcaggccaagaaacttgaggatgagtatgcc
gttatcggtaccttatctgaagtggctaatggacagacaggcaataagataagtttacag
cgcttcgtcttgagtgtgctgctcgatgatgtgctgctcgaggcgagtcatagattacag
atgatgagcaaggggcgttaccgactgatacgtaaagaggagagggcgaagggcaataag
gcctcaggactcgagctggaggtggaagatgcttacacctctaaggtgcgccccgtggcg
accctgagtggcggagagagctttatggcagcgctttctatggcgctggggttatcagaa
gtcgtacaggcctatgccggtgggattaaactcgataccctgtttatcgatgagggtttc
ggcagcttagatcaagactcactggatttagctattcgtaccttgatggatctgcaatct
tctggccgcatgataggggttatctctcatgtctccgagatgaaggagcagataggcacc
cgcatcgatatcatcaaaacagcccaaggcagtgaaacggttatcgttctgccttaa
DBGET
integrated database retrieval system
