Shewanella psychropiezotolerans: FM037_21650
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Entry
FM037_21650 CDS
T07745
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FM037_21650 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsh03400
]
FM037_21650 (recO)
DNA repair and recombination proteins [BR:
spsh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FM037_21650 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
FM037_21650 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
QDO85377
UniProt:
A0ABX5X216
LinkDB
All DBs
Position
complement(4952816..4953508)
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AA seq
230 aa
AA seq
DB search
MERGYVLHTRPFKDSSVLVNMLVDGHGRVDCVARLGSGKTSIKSILQPFQPLIFQLSGRT
SLRNMNSVEAGSPAIPLSGDVSFAGFYLNELLVRCIAVDHGAESLFFTYHKTLMSMAAGF
CESQLRYFELSLLKELGLMPTLRTDLSQDPIEPDYYYRLLPDEGFVNALGPKTSHYSGEM
LLALDEHRLEASHLRQAKYLMRLMLAACLGDKPLKSRALFRYKMTSPLTK
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggagcgcggctacgtgctccatacgcgtcccttcaaagactccagtgtgttagtcaat
atgctggtcgatggtcatggacgagtcgactgcgtcgctcgcctaggcagcggcaagacc
tccattaaaagcatactgcaaccttttcaacctctgatttttcaactatccggccgcaca
tcgctgagaaatatgaacagtgtagaggcggggagtccggccattcctctctcgggcgac
gtcagttttgccggtttttatctcaatgaattattggtccgctgcatcgccgtcgatcat
ggcgccgagtcgctgttttttacctaccacaagaccttaatgtccatggcggcaggtttc
tgtgagagccagttacgatattttgaattaagtctgctcaaagagttagggcttatgccg
acgctcagaaccgacctttcccaagatcccatagagcctgattactattatcgtttattg
cctgacgaaggcttcgtcaatgccttaggtcccaagacatcccactacagcggcgagatg
ttactggcattggatgaacatagattagaggcttcacatctaagacaagccaaatacctg
atgcgtttgatgttggcagcttgtttgggtgataagccacttaagtccagggcactattt
agatataaaatgacatccccgctgactaagtag
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