Shewanella psychropiezotolerans: FM037_21710
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Entry
FM037_21710 CDS
T07745
Symbol
nhaR
Name
(GenBank) transcriptional activator NhaR
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spsh03000
]
FM037_21710 (nhaR)
Transcription factors [BR:
spsh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FM037_21710 (nhaR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QDO85386
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All DBs
Position
complement(4963768..4964679)
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AA seq
303 aa
AA seq
DB search
MSHLNYNHLYYFWMVHKKGSVAKAAEALCLAPQTVTGQIRVLETRFKGSLFKRVGRSLEP
TELGELVFRYADKMFSLSYEMLDLLNYQKDENILFEVGIADALSKALASRVLLSVVPSDG
SMHLACFEATHESLMTRLREHKLDMILSDCAGESLKYPEILSKKLGECGIAFFSAEKYDK
PFPECLEQGKLLIPGKRTSLGQQLHHWFDENGLNVNILGEFDDAAMMKAFGYFKQGIFVA
PSIYKQDILSHDMHLLGETTDIKEVYHVMFAERMIQHPAVKRLLETDFTDLFEGRDAQVQ
HLL
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatctgaactataaccatctctactatttttggatggtacataaaaagggttcg
gtagctaaggctgccgaggctttgtgcctcgcgccgcaaactgtgacggggcagataagg
gttctggaaacacgttttaaggggagtctatttaaacgagtcggtcgctccctcgagcct
accgagcttggagaattggtatttcgttatgccgataagatgtttagtcttagctatgag
atgctggatctactcaactaccaaaaagatgagaatattctgtttgaggtgggcattgca
gatgccttatctaaagccttggcgagtagagtcttactctctgttgtacccagtgatggc
tccatgcatctggcctgcttcgaggcgacacacgaaagcctgatgacacgcttaagagag
cataagctggatatgatcttatctgattgtgcaggtgagtcgcttaaatatcctgagatc
ttatctaagaaattaggcgagtgtggcatagctttcttctccgctgagaagtatgacaag
ccgtttcccgagtgtttagagcaaggtaagttactcattcctgggaagcgaacttccctc
ggccaacaactgcaccactggttcgatgaaaatggactcaacgtcaatattcttggcgag
ttcgatgacgcggccatgatgaaggccttcggatatttcaagcaggggatcttcgtggct
ccttctatctacaaacaagatatcttgtcccatgatatgcatctgttaggtgaaaccacc
gacatcaaagaggtatatcatgtgatgtttgccgagcgtatgatccaacatccggcggtg
aaacgcctgttagaaacggatttcaccgatctgtttgaaggccgggacgcccaagttcag
cacttgttatag
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