Shewanella psychropiezotolerans: FM037_22180
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Entry
FM037_22180 CDS
T07745
Name
(GenBank) L,D-transpeptidase family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
FM037_22180
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
spsh01002
]
FM037_22180
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
FM037_22180
Peptidases and inhibitors [BR:
spsh01002
]
Cysteine peptidases
Family C82
FM037_22180
Peptidoglycan biosynthesis and degradation proteins [BR:
spsh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FM037_22180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
QDO85463
LinkDB
All DBs
Position
complement(5058853..5059755)
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AA seq
300 aa
AA seq
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MMRILLLFILSVIPGISMANVYDLPEKGSRLIGELQEHVVQKGDFFQTISKQYNVGILEL
MESNPGVDPFLPTPGTKLIIPTQMLLPDVPRKGIVLNLPELRLYYFPKNGKQVHVFPVGI
GRIGRETPEMVTKIKARIPNPSWTPPASIRKDHLERGEVLPAIVQAGPDNPLGNYAMQLS
YGDGSYLIHGTNKDFGIGMRVSSGCVRLNPDDIEWLFNQTKYGDPVRVINQTVKISTEPD
GRHIIEVHSALSKSELDMQQEKVVTMNANIVKFISQDDIDSFKANDALLTQNGLPVNITL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatgagaatattgctgttgttcatcttaagtgtaattccaggcattagtatggccaac
gtgtatgacctgccagaaaagggcagtcgtctcatcggtgagcttcaggagcatgtggta
cagaagggggattttttccagacgatttccaaacagtacaacgtcggcattctggagctg
atggagtcaaatccaggcgtggacccatttttacctacaccgggtactaagctcatcatc
ccaactcagatgttgttaccggatgtaccaagaaaaggtatcgtgctcaacctaccggaa
ttgagactctactactttcctaaaaatggtaaacaagtccacgtatttcctgttgggata
ggtcgcataggtcgtgaaactcctgagatggtcactaagattaaggccagaattcctaat
ccaagttggacgcctccggccagtattcgtaaggaccatctggaacgcggcgaagttcta
ccagccatagtacaagctgggccggataacccattgggtaattatgccatgcagctgtct
tatggtgatggcagttacctgatccacgggacaaacaaagattttggtatcggcatgcgc
gtcagctcaggttgcgtgcgtctcaacccagatgatatcgagtggctatttaatcagacc
aagtatggcgatcctgtccgggtgattaatcagacagtcaagatttctaccgagcccgat
ggtcgccatatcatagaagtacattctgccctgtctaaatctgagttagatatgcaacaa
gagaaagtcgtgactatgaacgctaacatcgtcaagttcatcagccaggacgatatagac
agtttcaaggctaacgatgcgttactgactcagaatggtttacctgtgaatataacgctc
tag
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