Shewanella psychropiezotolerans: FM037_23265
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Entry
FM037_23265 CDS
T07745
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh00061
Fatty acid biosynthesis
spsh00071
Fatty acid degradation
spsh01100
Metabolic pathways
spsh01212
Fatty acid metabolism
spsh02024
Quorum sensing
spsh04146
Peroxisome
Module
spsh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FM037_23265
00071 Fatty acid degradation
FM037_23265
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FM037_23265
09145 Cellular community - prokaryotes
02024 Quorum sensing
FM037_23265
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsh01004
]
FM037_23265
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsh04147
]
FM037_23265
Enzymes [BR:
spsh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FM037_23265
Lipid biosynthesis proteins [BR:
spsh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FM037_23265
Exosome [BR:
spsh04147
]
Exosomal proteins
Exosomal proteins of breast milk
FM037_23265
Exosomal proteins of breast cancer cells
FM037_23265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QDO85649
LinkDB
All DBs
Position
5302162..5303760
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AA seq
532 aa
AA seq
DB search
MAYDSDSTLDLTQYPSLIELIETASEKYADKTAYACLGHHASFSEIERDSRYFAAYLQSI
SGLKPGDRIAIQLPNIIQYVIAAYGAIRAGMVLVNTNPLYTERELTHQYNDSGAKVLVVL
SDLLPSLVNVVANTGIDTVISTHAADLLAPQAQPQVSYTAHKFLDVLAQGESLPFERFST
NLDTLAALQYTGGTTGLSKGAMLSHSNLIANAMQIKSRLSDKLVEGEEIFVAPLPVYHIY
AFMINLVLYFERGCCSVLVPNPRDIASLIKTLSDYKFTGFAGLNTLFVGLCHQPEFKALD
FSHLKVTISGGTALTQAAAGMWKETTNCTISEGYGLSETSPVVSLNAPGLEQLGTIGKPV
IGTKVKILDNDDNEVPQGETGELAVKGPQVMSGYWNKPEETAQVMTDDGYFKTGDIALAT
PDGLHKIVDRKKDMIIVSGFNVYPNEVEDVLANHEAVLECAVIGVADERAGEAVKAVIVL
ADQHSDPEAAKAAIISYCKEQLTAYKVPKQIVFMSALPKSTVGKILRRELRK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcatacgattcagattcaacactcgacctcactcaatacccatcactcatagagctg
atagaaacggcgagtgagaaatatgcagataaaacggcttatgcctgtttaggccatcac
gcaagtttcagtgaaattgaacgtgactctcgctattttgccgcctacctgcagagtatt
tcgggtcttaagcccggtgatcgtattgccatacagctgcccaacattatccaatatgtt
atcgccgcttacggtgccattcgcgctggcatggtgttagtaaacactaaccccttgtat
accgagcgcgagctgacccatcaatataatgattcaggcgctaaggtgttagtggtgctg
tcggatctactgccaagcctggtgaatgtggttgccaacacaggaatagacacggtaatt
tcgacccatgcggcggatctactggcacctcaggcccaaccgcaagtctcatatacggcc
cataaattcttagatgttctggcccagggcgagagcctgccattcgagcgattcagcacc
aatttagacaccttagccgctctgcaatacacaggaggcactacaggcctgtcgaagggt
gccatgctcagccacagcaatctcatcgccaatgccatgcagattaagtcacgcttaagc
gataaactcgtggaaggcgaagagatatttgtcgccccgcttcccgtctatcatatctac
gccttcatgataaacctggtgctctatttcgagcgcggctgttgttcggtattggtgcct
aaccccagagatatcgcctctcttatcaagacactctcagactataaatttaccggtttc
gccgggctcaacaccctgtttgtcggcctatgtcatcaacccgaatttaaggcgttagat
tttagtcacctcaaggtcaccatctcgggtggcaccgccctaacccaagccgctgctggc
atgtggaaagagacaacgaactgcaccatatccgaaggttacggcctatctgaaacgtct
cccgttgtctcactcaatgcaccgggcctcgaacaactggggactatcggtaaaccagtc
ataggcactaaggtcaagattctcgataatgatgataatgaagtacctcagggcgagact
ggcgaactggcagtgaagggccctcaggtgatgagtggctactggaacaagccagaggaa
accgcccaggtgatgacagatgacggttactttaagactggcgacatagcccttgccacc
ccagatggtctgcacaagatagtcgaccgtaagaaagatatgattatcgtgtcaggtttc
aacgtctacccgaacgaagtggaagatgtactggccaaccatgaagctgtgctcgaatgt
gccgtcataggcgtagccgatgagcgagccggcgaagcggtaaaagccgtgattgtactg
gcggatcaacacagtgacccagaagccgcaaaagccgccatcatctcctactgcaaagag
caattaaccgcctataaggtacctaaacagatagtgtttatgtctgccctaccaaagtcg
acggtaggtaagattttaagaagagagttaaggaagtaa
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