Shewanella psychropiezotolerans: FM037_24040
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Entry
FM037_24040 CDS
T07745
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
spsh
Shewanella psychropiezotolerans
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsh03016
]
FM037_24040 (tcdA)
Transfer RNA biogenesis [BR:
spsh03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
FM037_24040 (tcdA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ThiF
3HCDH_N
DAO
Pyr_redox_2
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
NAD_binding_7
Spermine_synth
ApbA
ELFV_dehydrog
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QDO85768
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All DBs
Position
complement(5496399..5497238)
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AA seq
279 aa
AA seq
DB search
MDNQVLSEAYLNRFAGIARLYGQKALTLFSQSHVAVVGIGGVGTWVAESLARSGIGEITL
IDLDDICVTNTNRQIHALKQTIGESKVEVMAQRILQINPECKVNQVEDFITTDNLDEYFI
GKKYAKEDQTDVLDYVVDCIDAVKPKAAMIAWCKRQKLPLVTVGGAGGQIDPTQVQISDL
AKTYQDPLLAKVRNLLRREYNFSKNLQRRFSIEAVFSTEQLVYPQADGSVCNSKANVDGS
MRMDCASGFGAVTVVTGTFGFVAASRVLIKLANKANNPS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
ttggataatcaagtgctttcagaagcgtatcttaatcgatttgccggtattgctcgtcta
tacggtcagaaggcattaacgctattttctcaatctcatgttgctgttgtaggcatcggt
ggtgttggcacttgggttgcggagtctttggccaggagtggtataggtgaaattactctt
atagatcttgatgatatttgtgtcactaataccaatcgtcaaatccatgccttgaagcag
accataggcgagtctaaagttgaagtcatggctcaacgtattctgcagattaaccctgag
tgcaaggtgaatcaggtagaggatttcatcactacagacaatctagatgaatattttatt
ggtaagaagtacgccaaagaagatcaaactgatgttttagattatgttgtcgattgtata
gatgcagtgaaacctaaagcggcgatgatagcttggtgcaagagacagaagttgccttta
gttactgtgggcggtgcgggcgggcaaattgacccgacgcaggttcagatatcagatctc
gctaagacatatcaagacccgctgttagctaaagtacgtaatttattgagacgtgagtat
aatttttctaaaaatttacagcgtcgattcagtatcgaagccgtgttttctaccgagcaa
ttggtgtatcctcaggctgatggtagcgtttgtaacagcaaggcaaatgtcgacggcagc
atgcgcatggactgtgcctcaggcttcggcgccgtgactgttgttaccgggacatttggt
tttgtcgccgcgagtagagtgttgataaagcttgccaacaaggctaataatccttcctag
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