Shewanella psychropiezotolerans: FM037_25030
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Entry
FM037_25030 CDS
T07745
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh00300
Lysine biosynthesis
spsh00470
D-Amino acid metabolism
spsh01100
Metabolic pathways
spsh01110
Biosynthesis of secondary metabolites
spsh01120
Microbial metabolism in diverse environments
spsh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FM037_25030 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FM037_25030 (dapF)
Enzymes [BR:
spsh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FM037_25030 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
STAS_2
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
QDO85929
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All DBs
Position
complement(5727420..5728262)
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AA seq
280 aa
AA seq
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MIHFTKMHGLGNDFMVVDGVTQNVFFSPEQIKRLADRNFGIGFDQLLLVEPPYDPDLDFH
YRIFNADGGEVEQCGNGARCFARFVRNKGLTNKQKIKVSTSNGKLTLRLEPDGNVTVNMG
IPVLEPSKIPFNAKRPEKTYLIQTDTGESKVQTFLCGAVSMGNPHCVLDVEDIQAADVEG
VGALLTQHERFPKGVNVGFMQVINSGHIKLRVYERGAAETLACGTGACAAVVVGQLQGKL
DKRVRVDLPGGTLTINWDGEGKPLWMTGPAEHVYDGQIQT
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
ttgatccatttcactaagatgcatggtttaggcaatgatttcatggtggtcgacggcgta
acacagaatgtgtttttttcgcctgagcagatcaaacgccttgccgatcgaaattttggt
ataggtttcgatcagttgcttctggtggagcctccttatgatcccgatctcgatttccac
tatcgtatttttaatgccgatggcggagaggttgaacagtgtggtaatggcgcacgctgt
ttcgctcgcttcgtgcgtaacaagggattgaccaacaaacaaaaaattaaagtcagtacc
tccaacggcaaacttaccctgcgcctggagcctgacggcaatgtcactgtgaatatgggc
attccggtactcgagccaagcaagatcccctttaatgctaagcggcctgaaaaaacatat
ttgatacagaccgacactggagaatctaaggtgcagacctttctctgtggcgctgtttcc
atgggtaaccctcattgtgttttggatgtcgaagatattcaggcggcagatgtcgagggg
gttggcgccttattgactcaacatgagcgcttcccaaagggagtgaatgtcggttttatg
caggtgattaactcaggtcatattaaactaagagtatatgagcgaggcgcggcagagacg
cttgcctgtggcactggtgcatgtgctgcggttgttgtgggtcagttacaaggtaagctc
gataagcgtgttcgtgtcgacctacctggtggtaccctgactattaattgggatggagag
ggtaaacctttatggatgacagggcctgccgaacacgtatatgacggacagatacaaaca
tga
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