Shewanella psychropiezotolerans: FM037_25035
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Entry
FM037_25035 CDS
T07745
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh00300
Lysine biosynthesis
spsh00470
D-Amino acid metabolism
spsh01100
Metabolic pathways
spsh01110
Biosynthesis of secondary metabolites
spsh01120
Microbial metabolism in diverse environments
spsh01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FM037_25035 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FM037_25035 (lysA)
Enzymes [BR:
spsh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FM037_25035 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QDO85930
UniProt:
A0ABX5X3J8
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All DBs
Position
complement(5728360..5729604)
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AA seq
414 aa
AA seq
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MDHFLYKNNELLAEDCSVVELARTHGTPLYIYSRATLERHWHAFDRAVADHPHLICYAVK
ANSNIAVLNVLARLGSGFDIVSGGELLRVIEAGGDPAKVVFSGVGKTAAEMEMALNIGIH
CFNVESAAELEQLNIVAGRIGKIAPVSLRVNPDVDAGTHPYISTGLKDNKFGIAMEQAEA
IFVRAAALPNLEVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLAEQGIHIEHFDVGGGL
GVPYNDETPPQPDVYAAALLERLGDRNLKLIFEPGRAIAANAGIFVTQVLYLKGNGDKHF
ALVDGAMNDLIRPALYSAWQNIIPVKPRDGETLNYDIVGPVCETGDFLGKDRALNLAAGD
YLAVRSSGAYGFTMSSNYNSRPRAAELMVDGDQAFVIREREKLTQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcattttctctataaaaataatgaattattggccgaagattgctctgtcgttgag
ctagctcgtacccatggtactcctttatacatctattcccgtgccacgttagagcgtcat
tggcatgcatttgatcgtgcggttgccgatcatccccatcttatctgttatgcggtaaaa
gcgaattcaaatattgccgtcctgaacgtgcttgcgcgtttgggtagtggtttcgacatc
gtttccggtggtgagttgctgcgagtgatagaagccggtggcgatcccgctaaagtggta
ttttcaggtgtaggtaagactgccgccgaaatggagatggcacttaatataggcattcat
tgttttaacgtcgaatctgcagccgagcttgagcagttaaatattgttgctggtcgtata
ggtaagattgcaccggtttccctgcgtgttaacccggatgtcgatgccggcacacaccca
tacatatctacgggccttaaagataacaagttcggtatcgctatggagcaagccgaggct
attttcgttcgcgccgccgcattaccgaatttagaagttaaaggtgtcgattgtcatatc
ggctcccagctaaccgagatccagcctttcctcgatgccatggatcgcatgttagcctta
atcgatcgactcgctgaacagggcattcatattgaacatttcgatgtgggtggtggctta
ggcgtgccttataacgatgagacaccgccccagcctgatgtatatgcagcagctttgctc
gaacgtttaggtgaccgaaatcttaagctcatcttcgaacctggtcgtgctattgctgcc
aatgcgggtatctttgtgactcaagtgctctatcttaaaggtaacggtgataaacacttt
gctctggttgatggtgctatgaatgatcttattcgtcctgcgctttacagtgcttggcaa
aatattatccctgttaagccgcgtgatggtgaaaccttaaattacgatatcgtggggcct
gtatgcgaaacaggtgacttcttaggaaaagacagagcgttgaatttagcggcgggtgat
tatctggctgtgcgctcatccggcgcctatggctttaccatgtcatctaactacaattca
cgccctagagcggccgagttgatggtcgatggggatcaggcttttgttattcgagagaga
gaaaaattgactcagctatggcaaggtgagcaactcctgccgtaa
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