Shewanella psychropiezotolerans: FM037_27880
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Entry
FM037_27880 CDS
T07745
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
spsh
Shewanella psychropiezotolerans
Pathway
spsh00061
Fatty acid biosynthesis
spsh00071
Fatty acid degradation
spsh01100
Metabolic pathways
spsh01212
Fatty acid metabolism
spsh02024
Quorum sensing
spsh04146
Peroxisome
Module
spsh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
spsh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FM037_27880
00071 Fatty acid degradation
FM037_27880
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FM037_27880
09145 Cellular community - prokaryotes
02024 Quorum sensing
FM037_27880
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
spsh01004
]
FM037_27880
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spsh04147
]
FM037_27880
Enzymes [BR:
spsh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FM037_27880
Lipid biosynthesis proteins [BR:
spsh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FM037_27880
Exosome [BR:
spsh04147
]
Exosomal proteins
Exosomal proteins of breast milk
FM037_27880
Exosomal proteins of breast cancer cells
FM037_27880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QDO86394
LinkDB
All DBs
Position
complement(6342823..6344619)
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AA seq
598 aa
AA seq
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MSLEQYHLTRLIKKQSLQLGDAIALEGYEMAAPWHQVSWSDFGSISSQVAQALINFGFEA
QDRVAILAQNSPQWTCADIGCLKTRAVVVPIYPTSTFEQASYIIDDAEAKLIFAGDQAHY
EMACKLTDVCASLIQVVVFDKNVTLQDNANHHYFDDLIADSYPAKTLIELDKRLDAANLD
DLLTLIYTSGTTGEPKGVMLDHRNFASMVRQHDSFLPFTPGDVSLAFLPLSHVFERGWSF
YVLSRGGHNVYLQNPMAVKEAIVQVRPHTLCVVPRFLEKVYSAVQDKVSKAPSSRQKLFA
WAMNVGHRQSEVGQGREKASLALSLQWKLADKLVFSKLKQVLGGRLKFMPVGGAALDPNV
SAFFQSIDVPVLCGYGMTETTATATCNTLANRVPGSNGNAIPEVEIKLGKDNEIFVRGDT
VMRGYYNRPQETADTFEDGWLKTGDAGRIDEHGNLFITDRIKELMKTSNGKYIVPQRVEG
KVGCCPFIEQVAIVADAKNYVSALIVPAFETLEIWAKEKGLHYESPMELLRHSHVIEHFD
QRLKTLQSDLAGFEKIKKFTLLPEAFSMEAGLITPTMKLRRKVIYHKYAREISAMYGK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcgagcagtatcatttaacacgattaatcaagaagcagagcctgcaactcggc
gatgctatcgcgctcgaaggatacgaaatggcggccccatggcatcaggtgagttggagc
gatttcggtagcatcagctcccaggtagctcaagccttgattaattttggcttcgaggcg
caagatcgcgtggctatccttgcacagaacagccctcagtggacctgtgccgatattggt
tgtctcaagactcgcgccgtagtagtgcctatctatccgactagcaccttcgaacaggcg
agctatattatcgatgatgccgaggcgaaacttatcttcgccggcgatcaagctcattac
gagatggcctgtaaactgactgacgtatgtgccagcttgatacaggtggtggtgttcgat
aagaacgtcaccctgcaagacaatgccaatcatcattacttcgacgaccttattgccgac
agctatccggcaaagacactcatcgagttggataaacgactcgatgcggccaatttggat
gacttgcttaccctgatatacacctcaggtaccactggtgagccaaaaggcgtgatgttg
gatcaccgtaattttgcctctatggtgcgtcagcacgatagcttcttaccatttactccc
ggtgacgtgtctctggccttcctacctttgagccatgtgttcgaacgtggctggagtttc
tacgtgcttagccgtggtggtcataacgtttatctgcaaaaccccatggcggtcaaagaa
gccatagtccaggtacgcccacacacgctttgtgtggtaccaagatttttagagaaggtg
tatagcgcggtacaggataaagtctctaaggcaccgagtagccgtcagaagttgttcgcc
tgggccatgaatgtgggtcatcgtcaatctgaggtgggtcagggccgcgagaaggcatca
ctggctttgagcctgcaatggaaactggccgataaattggtctttagtaagctaaaacag
gtactgggcggacgcctcaagtttatgcctgttggtggtgctgcgctagaccctaatgtg
agtgccttcttccagagtatcgacgtacctgtgttgtgtggctacggtatgactgaaacg
actgccacagctacctgtaatactctggctaatcgcgttcccggctctaacggcaatgcc
atccccgaagtcgagatcaaattaggtaaagataacgagatctttgttcgcggcgatacc
gtgatgcgcggttactataaccgtccacaagaaaccgcagataccttcgaagatggctgg
ttgaagaccggcgatgcgggtcgtatagatgagcatggcaacctgtttattaccgatcgt
attaaagagctgatgaaaacctctaatggtaagtatatcgtgccacaacgcgtcgagggt
aaggtcggttgttgtcctttcatcgagcaagttgccattgttgccgatgctaaaaactat
gtctccgccttgattgtcccagccttcgaaacactcgaaatatgggcgaaagagaagggg
ctgcattatgagtcacccatggagctgttacgtcacagccatgttatcgagcatttcgat
caacgcctcaagacactgcagagcgatctggctggtttcgagaagattaagaagtttact
ctgctaccggaagctttttcgatggaagcgggtcttattacaccgaccatgaagctacgt
cgtaaggtgatttatcataagtatgcccgtgagatcagtgctatgtatggtaaatag
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