Shewanella psychrotolerans: K0I62_00090
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Entry
K0I62_00090 CDS
T09306
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00071
Fatty acid degradation
spsj00280
Valine, leucine and isoleucine degradation
spsj00310
Lysine degradation
spsj00362
Benzoate degradation
spsj00380
Tryptophan metabolism
spsj00410
beta-Alanine metabolism
spsj00640
Propanoate metabolism
spsj00650
Butanoate metabolism
spsj00907
Pinene, camphor and geraniol degradation
spsj00930
Caprolactam degradation
spsj01100
Metabolic pathways
spsj01110
Biosynthesis of secondary metabolites
spsj01120
Microbial metabolism in diverse environments
spsj01200
Carbon metabolism
spsj01212
Fatty acid metabolism
Module
spsj_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
K0I62_00090 (fadB)
00650 Butanoate metabolism
K0I62_00090 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
K0I62_00090 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
K0I62_00090 (fadB)
00310 Lysine degradation
K0I62_00090 (fadB)
00380 Tryptophan metabolism
K0I62_00090 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
K0I62_00090 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
K0I62_00090 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
K0I62_00090 (fadB)
00930 Caprolactam degradation
K0I62_00090 (fadB)
Enzymes [BR:
spsj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
K0I62_00090 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
K0I62_00090 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
K0I62_00090 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
K0I62_00090 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
DUF3048
PDH_N
Motif
Other DBs
NCBI-ProteinID:
QYK01443
LinkDB
All DBs
Position
complement(20780..22930)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAAGSVNKFDRETLDSLNTALDSLTQADNIKGLVLTSG
KDAFIVGADITEFLGLFAQDDAVLLKWLEEANSVFNKLEDLPFPTISAIKGFALGGGCET
ILATDMRVADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNALEWITTGKDQRPEAALK
VGAIDAIVAPEALETAAIQMLKDAIAEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FQVAGKHYPAPMAAVDVIEKAAGAERTEALHVEHQAFLKLAKTEVAQALIGIFLNDQLVK
GKAKKASKQAQPVKSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLGEASKLL
TAQIKRGRSTPEKMAAVLNNITATLDYSALKQADVVVEAVVEHPKVKATVLAEVEQHVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEVIRGESSSEETIASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLADGADFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKTGKDAIDVMFEAQRFGQKNAKGFYQYSVDRRGKP
KKEIDAVSYELLGAAFGELKEFSKDDIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDKMRELAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctatcaaagtcctacaattcaggttgaactacttgaagacaatatcgctcggctc
tgtttcaatgccgcgggctcagtcaataagtttgacagagaaaccctcgactcgctcaac
accgcattagacagcctaacgcaagcagataatattaaaggtctagtgcttacttcaggc
aaagacgcttttattgttggtgccgacatcaccgaatttttaggcttattcgcccaagat
gatgccgtactccttaaatggttagaagaagccaatagcgtatttaataaattggaagat
cttcccttcccaaccatctcagctattaaaggttttgcgttaggcggtggttgcgaaacg
attttagcaaccgatatgcgcgttgcggatacgaccgcacgcatcggcctacccgaaacc
aaactagggataattccaggctttggtggcacagtacgactacctcgcgtcattggcgca
gataacgcacttgagtggatcaccacaggtaaagaccaacgcccagaagcggcattaaaa
gtcggcgctatcgatgctattgttgcacctgaagcactagaaaccgctgcaattcaaatg
ctaaaagatgcaattgccgaaaagattgattggcaagcgcgccgtcaacgtaaactatcg
ccattaacactgccaaaacttgaagccatgatgtcatttgccactgctaaaggcatggtg
ttccaagttgccggtaaacactatccagccccaatggctgcagtagatgtgattgaaaaa
gctgcaggcgctgagcgaacagaggccttacacgttgaacatcaagctttcttaaagcta
gcgaagaccgaagttgctcaggcacttatcggtatcttccttaacgatcaactagtaaaa
ggcaaagcgaaaaaagcctcaaaacaagctcagccggtgaagtctgccgctgtattaggt
gccgggattatgggtggcggtattgcatatcaaagtgcgagtaaaggcacacctatcgta
atgaaagatatcgcccagccagcacttgagcttggtttaggtgaagcttcgaaattgctt
accgcgcaaatcaagcgtggccgttcaacgccagaaaaaatggcggcggtactgaataac
atcactgccaccttagattacagtgcgctcaagcaagccgacgttgttgtcgaagctgtt
gtcgaacacccaaaagtgaaagcgactgttttggctgaagtagagcaacatgttagcgaa
gatgccatcatagcctctaacacctcaaccatctcaatcaacttgctagccaagagcctg
aagaaacctgagcgtttctgcggtatgcacttctttaacccagtacacaagatgccgcta
gttgaagttatccgtggtgagagtagctcagaagaaactatcgcatcggttgtcgcctat
gccgctaagatgggtaagacgcctattgtagttaacgactgccctgggttcttcgtcaac
cgcgtgttattcccttactttgcaggctttagtggcctactcgccgatggcgccgacttt
gccgctatcgataaagtaatggaaaagcagtttggctggccaatgggtcctgcttaccta
cttgatgtagtcggtctagatactggtcatcacgcacaagcggtgatggctgaaggtttc
ccagacagaatgggcaaaaccggtaaagacgcaattgatgtgatgttcgaagcccagcgt
ttcggacaaaaaaatgccaagggtttctatcaatactcagtcgatcgtcgtggtaaaccg
aagaaagagatcgatgccgttagttacgagttactgggcgccgcctttggcgagctaaaa
gagttcagtaaagacgacattattgctcgcaccatgatcccaatgatcatcgagactgta
cgttgtcttgaagaagggattatcgctacgccagctgaagccgatatgggacttgtttat
ggtcttggattccctccatttagagggggtgtgttccgttacatcgacactatgggcgtt
gccaactttgtcgcattagccgacaaatatgctcaccttggcggactgtaccaagtaaca
gacaagatgcgtgaacttgcagccaacaacggtagctactaccaagcctaa
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