KEGG   Shewanella psychrotolerans: K0I62_00235
Entry
K0I62_00235       CDS       T09306                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
spsj  Shewanella psychrotolerans
Pathway
spsj03030  DNA replication
spsj03430  Mismatch repair
spsj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:spsj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    K0I62_00235
   03430 Mismatch repair
    K0I62_00235
   03440 Homologous recombination
    K0I62_00235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:spsj03032]
    K0I62_00235
   03400 DNA repair and recombination proteins [BR:spsj03400]
    K0I62_00235
Enzymes [BR:spsj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     K0I62_00235
DNA replication proteins [BR:spsj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     K0I62_00235
DNA repair and recombination proteins [BR:spsj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     K0I62_00235
SSDB
Motif
Pfam: RNase_T RNase_H_2
Other DBs
NCBI-ProteinID: QYK01468
LinkDB
Position
complement(55753..56472)
AA seq 239 aa
MLKKLLSPPTIDWPGKFKQKLNVINNDTLIAYYSTPLPEGNKPIGEIEFLSMDFETTGLN
PEKDDIISVGTVPFNLQRIFVNRAKYWTVRPREKLEEESVIIHGITHSDILDAPDLSVVF
EQILNEMAGKIIVVHCQQIERQFFERALMTRINKGIEFPVVDTMVLESKIQQKLRGGIWH
RLKGKKPQSIRLGACRQRYGLPAYPPHHALTDAIATAELLQAQIAHHYDLQQAIEKFWQ
NT seq 720 nt   +upstreamnt  +downstreamnt
atgctaaaaaaactgctttcgcccccaaccattgactggccaggcaagtttaagcaaaag
ctcaatgtgattaacaacgatacattgatcgcatattattcaaccccgttacctgaaggc
aataagcctattggtgagattgaatttctatcgatggactttgagacaacggggttaaac
ccagaaaaagacgatattatcagcgtcggcacggtccctttcaatctacaacgtatcttt
gttaatcgagctaaatattggactgttagaccaagagaaaaattggaagaagagtcagtg
atcattcatggtatcacccatagtgatatcttagatgccccagacctatccgtagtattc
gaacagatattgaatgagatggcaggcaaaatcattgtggtgcattgccaacagatagag
cgtcagttttttgagcgcgccttaatgaccagaattaataagggcatagaattccccgta
gtcgacactatggtgcttgaatcgaaaattcaacagaaattacgcgggggaatttggcac
cggcttaaagggaaaaaaccgcagtcgataagattaggcgcctgccgccaacgttatggc
ttaccagcttatccacctcaccatgctttaacagatgccatagcgacagcagaattgctg
caagcacagatagcacatcactatgatttacagcaggctatcgaaaaattctggcaataa

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