Shewanella psychrotolerans: K0I62_00490
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Entry
K0I62_00490 CDS
T09306
Name
(GenBank) PAS domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj02020
Two-component system
spsj02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
K0I62_00490
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
K0I62_00490
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
spsj02035
]
K0I62_00490
Bacterial motility proteins [BR:
spsj02035
]
Flagellar system
Chemotaxis proteins
MCPs
K0I62_00490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_8
PAS_4
PAS_9
PAS
HAMP_2
PAS_7
sCache_3_3
PAS_10
Motif
Other DBs
NCBI-ProteinID:
QYK01516
LinkDB
All DBs
Position
complement(108975..111569)
Genome browser
AA seq
864 aa
AA seq
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MDAMNSSNLKTNSMPIIGLMLSVLAAGLAFTQQPSLWIGATQLIAIAFIAVGIQKESQIK
RRFQQGFSELLTAVEAKTPPSFSHIDLPHWSQLTEALTELWQTNSTNKAPAQALEICQAN
VMLADPQGNITFFNQSLRKTLQDAEEDIRQAFSSFNVKDLVGTNMDIFHKHPSHQQQLIA
NLKQPHSALISVGTRTFSLIASPVFDDNQQRIATVVEWEDKTEQLAKEVIEQQLAEENSR
IKQALDVCKANVMVADANYDIIYLNDSVFEMLKENESTLQQSLPKFATATLIGSNIDIFH
KDPSHQRKMLDMLTTSYNASINVAGLDFTLIATPVFENGTRTGTVVEWQDVTAKLAQEAK
ERQLAAENARIRQALDNVSSNTMVADADLNIIYMNTAVSNMFKHAQQDIVKDLPDFDANN
LIGVNIDRFHKKPSHQRNLLGSLSSTYTSQLKVGGRTFQVVANPITDDNGKSIGTVVEWA
DRTAEVAIEQEIDSIISAATTGDLSGRISTEGKEGFFLNLSNGLNRLVGIADNVIGDVVN
MFDGLACGDLTRQINGEYHGQFGKLQQDANATVSKLTEVLGGINQSANTVTSGAEEIAQG
NADLSQRTEEQAASLEQTASSMEQMTATVTQSAQNATIANELAQEANTKAEHGGKVVEQA
VTAMEAINDSSKRIADIIGVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLA
QRSAGAAKEIKELIRDSVNKVTDGTNLVNQSGETLADIVQAVTKVADMISQISIASDQQS
SGIQEVNKAVSQMDEMTQQNAALVEQVSAAGDAMAEQARNMKAQLEFFQTKELSHSGITT
APLALVAGDSHGKLKISDEEWTEF
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atggatgctatgaactcgagtaatctcaaaactaacagcatgccaattatcggactgatg
ctcagcgtgctggctgcaggcttggcattcacacaacaaccctccttatggattggcgca
actcaattgatcgcgatagcatttattgctgtagggattcaaaaagagagtcagatcaaa
cgtcgttttcaacaaggattcagcgaactccttaccgctgtcgaggcgaaaacgcccccg
tcgttttcacatattgatctccctcattggagtcaattaaccgaagcattaaccgagctt
tggcaaaccaacagcaccaataaggcgccagcccaagcactagagatatgccaagcaaat
gtcatgctcgccgatcctcaaggcaatattaccttctttaatcaatcactacgaaaaaca
ttacaagacgctgaagaggatataaggcaagcattctcttcttttaatgtaaaagattta
gtgggaaccaatatggatattttccataagcatccctctcatcaacaacagctcatcgcc
aatttaaagcagccacactcggcactaatcagtgtgggaactcgtacattttcacttatt
gcctcacccgtatttgatgataaccagcaacgaatagccactgtagtcgagtgggaagat
aaaaccgaacaactcgccaaagaagttatcgagcaacaactcgcagaagagaacagccgc
attaaacaagctctcgatgtatgtaaggctaacgtaatggttgccgacgcaaactacgac
atcatttaccttaatgactccgttttcgagatgctcaaagaaaacgaatcgaccttacag
caaagccttccaaaatttgccaccgccacattaattggcagcaatatcgacattttccat
aaagatccatctcatcaacgcaaaatgctcgacatgctaacaaccagctacaacgctagc
atcaacgtagcaggattagactttaccttaatcgcgacacctgtttttgaaaatggcaca
cgtacaggcaccgttgtcgaatggcaagatgttacagccaaactggcacaagaagctaaa
gaacgacaactcgctgcagagaatgcgcggatcagacaagcgttagataatgtctcatca
aatacgatggttgccgatgcagacctgaacatcatctacatgaatactgcggtaagtaat
atgttcaaacatgcacagcaggatattgttaaagatttaccagacttcgatgccaacaat
ctcattggcgtcaatatcgatagattccataaaaaaccaagtcaccagcgtaacctatta
ggctctctttcctcgacctacaccagccaactaaaagtgggcggcagaacattccaagta
gtggctaaccccattaccgacgacaatggtaagagtataggaaccgttgtggaatgggcc
gatagaactgccgaagtcgccatagaacaagagattgattcaattatctccgccgcgact
acgggtgatctatcaggacgcattagcacagagggcaaagaaggctttttcctcaatcta
tctaatgggctcaaccgcttagtgggcattgccgataacgttattggtgatgtcgttaac
atgttcgatggcctcgcctgcggtgatctcaccagacagattaatggtgaatatcatggc
caatttggcaagttacaacaggatgcaaatgcgacagtatcaaaactgaccgaagtgctc
ggtggcataaatcaatcggccaataccgtaacctctggtgcagaagagatagctcaaggc
aacgccgatctcagtcagcgtaccgaggaacaagcggcctcactcgaacaaactgcatca
agcatggaacagatgacagccaccgtaacccaaagtgcacaaaatgccaccatcgcaaat
gaactcgcacaagaggcaaataccaaagccgagcatgggggcaaagtcgttgagcaagcc
gttacggcgatggaggcgataaatgattccagtaaacgcatcgccgatatcataggtgtt
attgatgaaatagcatttcaaaccaatcttctcgctcttaacgctgcagttgaagccgct
cgagcaggtgaacaaggcagaggcttcgctgttgttgctggcgaagtgagaaacctagca
caacgcagtgcgggagcggcaaaagagattaaagagttgattagagatagcgtaaacaaa
gtcaccgacggtacaaatttggtgaatcaatcgggtgaaaccttagccgatatcgtccaa
gcggtaacgaaagtagccgatatgattagtcaaattagcatcgcttccgatcaacaatct
tctggcatccaagaggttaataaggctgtgtctcaaatggatgaaatgactcaacaaaat
gcagccttagtcgaacaggtttcagcggcaggtgatgctatggcagagcaggcaagaaac
atgaaagctcaattggagttcttccaaaccaaagagctcagtcactcaggtatcaccacc
gcaccgctagccttagttgcaggcgatagccatggaaaattgaaaattagcgatgaagag
tggactgaattttaa
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