Shewanella psychrotolerans: K0I62_02940
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Entry
K0I62_02940 CDS
T09306
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
spsj03012
]
K0I62_02940
Translation factors [BR:
spsj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
K0I62_02940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
AAA_16
AAA_22
KAP_NTPase
ATP-synt_ab
RsgA_GTPase
DUF815
MeaB
ABC_tran_CTD
AAA_18
Pox_RNA_Pol_19
DUF87
Motif
Other DBs
NCBI-ProteinID:
QYK01949
LinkDB
All DBs
Position
complement(644432..646345)
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AA seq
637 aa
AA seq
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MITITQAQLIRGTKTLLDETSLTIYPGHKVGLVGANGTGKSSLLALILGHLSLDKGEINV
PSGWQISTVAQETPALDVSALEYVIDGDREYRQLEQQLHQAQLDDDGHAIALLHGKIDAI
GGYAIHSRAASLLAGLGFSETEQKNPVKSFSGGWRMRLNLAQALLCRAELLLLDEPTNHL
DLDTMYWLEGWIKSYQGTLILISHDRDFIDGIVDEIVHVEHQKLNYYKGNYSAFERIRAE
RMAQQQVAFDRQQKERSHMQSFVDRFRYKASKAKQAQSRLKALERMTELLPSKADSPFYM
EFRPPEALPNPLVKMEQVSVGYGDKAILNHVHLNLVPGARIGLLGRNGAGKSTLIKLLSE
QLKPMSGIYETNPGLNIGYFAQHQIEFLRLDDSPLQHLSRLSPNHREQELRDFLGGFGFN
GDMALAPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQSFEGAM
IIVSHDRHLLRLSCSDYYLVDQGEVRSFDGDLDDYHQWLLDAAKSESKNETALEASPAQD
KKLQKRLEAELRQKLSPMKKVQSKLEKSQQQYTERLSELENMLADTSLYDADNKAKLTDV
LSERTKLTQALEESELEWLELQEEIETVEQSVKAELS
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccattactcaagcgcagcttattcgtggcaccaaaaccttattggacgaaacg
tcactaaccatctatcccggccataaagtggggttggttggcgccaatggcacaggtaag
tcatcactactcgccttaattttagggcacttgagcttagataagggtgagatcaacgtg
ccaagcggctggcaaatatccacagtggcacaggaaacaccagcgctggatgtcagtgca
ctagaatatgttatcgatggtgaccgagaatatcgtcagcttgagcagcaactacatcaa
gcccaactcgatgacgatggtcatgcgattgcgctactccatggaaaaattgatgccatt
ggcggttatgctattcattctcgtgctgcgagcttattagcaggcctggggtttagtgaa
actgagcaaaaaaatcccgttaagagcttttccggtggttggcgcatgcgccttaacttg
gcccaagcactattgtgtcgcgcagaactgctactcctcgatgagccaaccaaccactta
gatttagataccatgtattggcttgaaggttggattaagtcttatcagggcacgctgatc
ttaatcagtcatgatagggactttatcgatgggattgtcgatgagatagtccatgtagag
caccagaaactcaactactacaaaggtaattacagcgcctttgaacgtattagagccgag
cgtatggcgcagcagcaagtggcttttgatcgccaacagaaagagcgctcgcacatgcag
tcatttgtcgaccgtttccgctataaagccagtaaggctaaacaagcgcagagtcgccta
aaagccctcgaacgcatgaccgagctgttaccctcaaaagccgatagtccattttatatg
gagttcagaccacctgaagcactgcctaaccccttagtaaaaatggagcaggtctccgtg
ggctatggcgataaagccatcttaaatcatgtacacctaaacttagtcccaggggcgcgt
atcggcctacttggtcgtaatggcgcgggtaaatcgacgctcattaagctattgtcagaa
caactcaagcccatgagtggcatctatgaaaccaatcccgggcttaatattggttacttc
gctcagcatcaaattgaatttctacgcttagatgattcgccactgcagcatctaagtcgt
ctatcacctaatcacagagaacaggagctgcgcgacttcttaggcggctttggttttaac
ggtgatatggcgctcgctcctgttcgccccttctctgggggagaaaaggcgcgcttagtg
ttagcgctgctggtgtggcaacgccctaacctattactgctcgatgaacccaccaaccat
ttagatcttgagatgcgtcatgcgctaaccatggcactacaatcgttcgaaggcgcgatg
atcattgtgtctcacgataggcatctgttgcgtctcagctgcagtgattattacctggtc
gaccaaggtgaagtacgcagtttcgatggcgatctcgatgactatcatcagtggttactc
gatgccgccaagagtgaaagtaagaacgaaacagcgctagaggcatcaccagcccaagat
aaaaaattgcaaaaacgcctcgaagcagaattaagacaaaaactttcgcccatgaagaaa
gtgcaaagcaaactggaaaaaagccaacagcagtatactgaaagattaagcgaacttgag
aacatgctcgcagacacgagcttgtatgatgccgataataaagccaagctcaccgacgta
ttaagcgagcgaactaagctaactcaagccctcgaagagagtgaacttgaatggcttgaa
ctgcaagaagaaatagaaacggtagagcaaagtgtcaaagctgaattaagctag
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