Shewanella psychrotolerans: K0I62_03755
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Entry
K0I62_03755 CDS
T09306
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00630
Glyoxylate and dicarboxylate metabolism
spsj00680
Methane metabolism
spsj01100
Metabolic pathways
spsj01120
Microbial metabolism in diverse environments
spsj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
K0I62_03755 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
K0I62_03755 (fdhF)
Enzymes [BR:
spsj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
K0I62_03755 (fdhF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer4_7
Pyr_redox_3
NAD_binding_8
Fer2_4
DAO
Fer4
NAD_binding_7
HI0933_like
FAD_oxidored
Fer4_8
Fer4_9
Fer4_6
Fer4_16
Amino_oxidase
Fer4_10
Fer4_18
FAD_binding_3
FAD_binding_2
GIDA
Fer4_21
Fer4_17
AlaDh_PNT_C
2-Hacid_dh_C
Thi4
F420_oxidored
Fer4_2
Lys_Orn_oxgnase
Fer4_22
Fer4_15
Motif
Other DBs
NCBI-ProteinID:
QYK02102
LinkDB
All DBs
Position
complement(851021..855253)
Genome browser
AA seq
1410 aa
AA seq
DB search
MIKLSFDGKTANASLGENLLTCATNAGITIPNLCHHTPQPHSNSTINNKQSCGLCYVELT
NSKGEVTTVKACETRITETVSIITHSAALSKIRQASLKQLLSDHFADCEAPCQQACPAGV
DVQSYLFQIAQGNHREAVKIIKDTLPLPLSIGRVCPAFCESACRRGELDEPLAIRQLKRH
AADIDLQGDSYIPNRAPATGKKVAIIGSGPAGISAGFYLSNAGHEVTVFEAMPKAGGWLR
YGIPEYRLPKAILDQELELLCKNGMNIQTNTRLGRDIHLNGLLDSFDAACLAIGAQKAVP
MNYPGVELDGCYLGVDYLRDFCTDKHYITGKKVAVIGGGNTAIDCARTALREGAEVTLVY
RRTRDEMPAEDYEIEEAEHEGVRFYFLTNPIENHADSHGRINSVTFEKMALGEADASGRR
SPKATGETFNEAFDTVIPAVSQTPDMAFLGHPESQLSTGEVALTRWNTFSGCEHTMSSGI
EKLFVLGDSRTGPATAVAAVADGKKAAEAIQKQLNDQLTCELTQKSFNSEKRSQTPLNTH
HFPQRLNQKKAKMAELSVEARQQNFDEIELGFSDETAIAEAARCLECGCQANTDCKLRDY
ASEYRIDNTTLDSEQHRHFVQDSSSPFINFDPNRCISCGACVAMCHQQAGHNAISFEADS
YLAIPQGAPHDTLRQAPRAGFTATMADSQCVQCGNCVQVCPTGALTDARDKAQGRKAALK
QTSTICTYCGIGCRMTLHTDPTNDKILHISGDAASPVNEGMLCVKGRFGFDFVNSAERLT
TPLLRKQGQLVEVSWDEAIAYIASKLKQIKEQHGSDAIAGLASAKATNEDNYLFQKLFRS
VIGTNNIDHCARLCHASTVTALQDALGSGAMTNDIPSIKESDLIFILGSDTEVAHPIIAS
KIKQAIDQHGARLVVADPKRVSIADKAELYLCHRPGSDVMLLNALMQQIIVNNWHDLDYI
ERRVDGYNALYNEVMKPDYSLENAALITGVSAEQISLLAKMIGTAKKTAVYYAMGITQHT
SGHDNVTAIANLQLLCGNIGVEGAGINPLRGQSNVQGACDMGALPNYFTGYQKVDDPKVQ
RRFRNAWHNEELPSNIGIAATEMMHSLAHGQLKALYVMGENPILSDPDQAHVLKGLKNAE
LLIVQDIFMTETAQLADVALPAASFAEKQGHFTNTERRVQQLQAAIPSPGEARQDWQIIN
NIANELGANWSYQDERQIWHEINQVTPQYRGINWQSLDATNPITSEGIQWPCPSEGHPGT
PILHTEQFTRGRAIMTPVGYRLPAEMPCKEYPFMLSTGRLLEQFHTGTLTRKTDGLNQLA
TPRVMISAFDADKLQLSNGDMLTLSTRRGAINIAAFVTKRAQAGVLFLPFHFAEAAANKL
TNNVLDPVAKIPEFKICAVKVEKAQYSEAV
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgataaaactcagtttcgatggtaaaacggctaatgcatccttaggtgaaaacctgctt
acctgtgccaccaatgcaggaataacaatccctaatttgtgtcaccacacacctcaacct
cacagcaatagcacaattaacaataaacagagctgcgggctctgctatgtagaattgacc
aattccaaaggtgaagtaacaacggtcaaagcctgcgaaaccaggataacggaaacagtc
agcatcattacccattcagcagcactgagtaagatccgccaagcatccctaaaacaacta
ttaagcgatcattttgccgattgtgaagctccttgccagcaagcctgccccgcaggcgtc
gatgtccaatcctacctatttcaaatagctcagggcaatcaccgagaagcagtcaagata
atcaaagataccttaccactgcccttatctatcggccgcgtatgccccgcattttgtgag
tctgcatgccgccgaggcgaactcgatgagccgttagccataaggcaacttaaacgccat
gcggccgatatcgatctgcagggtgatagttacattcccaatagagcgcctgcaacgggt
aaaaaagtcgctattattggtagcggcccagcaggaataagcgccggcttttatctatcc
aatgctggccatgaggtcactgtatttgaggcgatgcccaaagctggcggctggttaaga
tatggcattcccgagtatcgcctgcctaaagcgatactggatcaagaactcgaattactc
tgcaaaaatgggatgaatattcaaacaaatactcgtctcggaagagatattcacctcaat
ggtctattggactcttttgatgccgcctgcctggccattggagcgcaaaaagccgtaccg
atgaactatccaggggtcgagctcgatggctgctaccttggggttgattacctgagagac
ttttgcaccgataaacactacatcacaggcaaaaaagtcgccgtcattggcggtggcaat
acggctatagactgtgcccgcacggctctcagagaaggtgcagaagtcacactggtttat
cgacgcactcgtgatgagatgcctgccgaagattatgaaattgaagaggctgaacacgaa
ggtgtacgcttctattttctaactaatcccattgagaatcatgctgacagtcatgggcgt
attaatagcgtcaccttcgagaaaatggcactcggtgaagcagatgcttcggggcgacga
tcgcctaaagccactggcgaaaccttcaatgaggcgttcgatacggtgatccctgcggta
tcacaaacacccgatatggcgtttcttggtcaccccgaaagccagttgtctacaggtgaa
gtcgcactaacgcgctggaacaccttctcaggttgcgaacacaccatgtcatctggtatt
gaaaagttatttgttctcggtgactctcgaacaggccccgccacagcggtagccgccgta
gcagatggcaagaaagccgctgaagctatccaaaaacagcttaatgaccagctcacatgt
gaactcacacaaaaatcgtttaactcagaaaaacgcagccaaaccccattaaatacgcat
cattttcctcagcgattaaatcaaaaaaaagcaaaaatggctgaactttcagtagaagcg
agacagcagaacttcgatgaaattgagcttggatttagtgatgaaacggccattgcagaa
gcggctcgctgcctcgaatgtggctgccaagctaacaccgattgcaagctcagggattat
gctagtgaatatcgtatcgacaacacaacactcgacagcgagcaacaccgacattttgtc
caggatagcagctcaccttttatcaactttgatcccaatcgctgcatcagttgcggcgcc
tgcgttgccatgtgccaccaacaagctggacataatgcaatcagctttgaggccgacagt
tatctggctattccgcaaggggcgccacatgacacacttcgtcaggctcctcgagccgga
tttactgccacaatggcagacagtcaatgcgtgcagtgcggcaactgtgttcaagtttgt
ccaactggcgcgctaaccgatgcgcgcgacaaggcccaggggcgcaaggccgcactaaaa
caaacatccactatctgcacctattgtggaattggttgtcgaatgacccttcataccgac
ccaaccaacgacaaaatactgcatataagtggcgacgcagcatcacctgtcaacgaggga
atgctgtgtgtcaaagggcgatttggctttgactttgtaaatagcgctgagcgtctaact
actccactgctacgcaagcagggacaactggtcgaagtaagctgggatgaagctatcgcc
tatattgcaagcaagcttaagcagatcaaagagcagcatggtagcgatgccatcgcaggt
cttgcatccgccaaagccaccaatgaagataactatctatttcaaaagctatttagaagc
gttatcggtaccaataatatcgatcactgcgctcgtttgtgtcatgcctcaacggtaaca
gctctgcaagacgccctaggcagtggcgccatgactaacgatattccatcgattaaagag
tctgatctcatctttatattaggctcagatactgaagtggctcatcccattatcgcctcc
aagataaaacaagctatcgaccaacatggtgcaagactcgtcgttgccgatccaaaacga
gtcagtattgccgacaaggctgagctttacctttgccatcgcccaggttcagatgtcatg
ctgcttaatgccttaatgcagcaaatcattgttaataattggcacgatcttgattacatt
gaacgccgtgtcgatggatacaacgcgctatacaatgaggtgatgaaaccagattacagc
cttgaaaatgcggcattaatcaccggtgtcagtgcagagcagataagcttacttgccaag
atgattggcactgccaagaagacggcagtttattacgccatggggatcactcaacacacc
agtggccatgacaatgtcacagctattgctaacctacaactgctgtgcggcaacataggc
gtcgagggagcggggatcaatcctctacggggccaaagcaacgtacaaggcgcctgtgat
atgggggcgctacctaactactttactggttatcaaaaagtcgatgacccgaaggtacag
cgccgctttagaaacgcttggcacaacgaggaactaccttcaaacattggcatagccgca
accgagatgatgcattccttggctcacggacaacttaaagcgctctatgtcatgggggaa
aatccgattctgagcgaccctgatcaggcccatgtactcaaagggttaaaaaatgctgaa
ttattgatagttcaagatatctttatgacagaaacggctcagcttgccgatgtcgcgcta
cctgcggcgagctttgctgaaaaacaggggcacttcaccaataccgagcgccgtgttcag
cagttacaagcggctatcccatctccgggtgaagctcgtcaagactggcagatcattaat
aatatcgccaatgaactcggtgccaattggtcatatcaagatgagcgccaaatttggcat
gagatcaaccaagtcacaccacaataccgcggcattaattggcagagcctcgatgcaact
aaccctataactagcgaagggatacagtggccttgcccaagtgaagggcatcccggcact
ccgattttacatactgagcaatttacccgaggcagagcaattatgacgcctgtaggctat
agactgccagcggaaatgccctgtaaagagtacccttttatgctgtcgacagggcggctt
ctagaacagttccatacaggcactctgactcggaagactgatggcttaaaccaattagcg
acacctagagtgatgatatcggctttcgacgccgataaactgcagctcagcaatggcgat
atgttaactctttctactcggcgtggagcgattaatattgctgcttttgtgactaagcga
gcgcaagctggcgtgctgtttttaccatttcactttgccgaggcggcagccaataaactc
actaataatgtgctcgatccggtagcaaaaattcctgagtttaagatctgcgcggtgaaa
gttgaaaaagcacaatacagcgaagcggtatag
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