Shewanella psychrotolerans: K0I62_03780
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Entry
K0I62_03780 CDS
T09306
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spsj03009
]
K0I62_03780
Enzymes [BR:
spsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
K0I62_03780
Ribosome biogenesis [BR:
spsj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
K0I62_03780
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
QYK02106
LinkDB
All DBs
Position
complement(862664..863278)
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AA seq
204 aa
AA seq
DB search
MSDSQQDLNRDRIKASHFKIFKPYNYLSQFVPERRKRKPLLADLAAFPKGIMAIGRLDHD
SEGLLLLTTDGMTSHLVRSKSIEKEYYVQVDGDIDAKALALLTTGVNIGIKGEKYHTLPC
KVFKLTQIPELPDRGRAIRDPRHGPTSWISITLTEGKNRQIRKMTAAVGFATLRLVRVRI
GNIHLDNMASGEVRQIDDLPSAIC
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagtcaacaagacttaaaccgtgatcgtatcaaagcgtctcactttaaaatt
ttcaaaccttataattacttaagtcagttcgtacccgagcgacgtaaacgtaaaccgctt
ctggctgatttggctgccttcccaaaaggcataatggctattgggcgcctagatcatgat
tctgaaggattattactattgacgaccgatgggatgacaagccacctagttcgcagcaaa
tcaatagaaaaagaatattatgtacaggtagatggagatatagatgctaaggcattagcg
ctgttaacaacaggggtcaatattggcattaaaggggaaaagtaccataccttaccttgc
aaggtatttaaactaacacagattcccgaactacccgatagaggacgagccatccgagac
ccacgccatggcccgacaagttggatatccattacgctcaccgaaggtaaaaaccgtcaa
atacgtaaaatgaccgctgcagttggctttgccaccctgcgcctagtgagagtgcgtata
ggcaatattcatctcgataatatggcttcaggcgaagtaagacagatagatgacctcccc
agtgcaatatgttaa
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