Shewanella psychrotolerans: K0I62_04875
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Entry
K0I62_04875 CDS
T09306
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
spsj
Shewanella psychrotolerans
Pathway
spsj00550
Peptidoglycan biosynthesis
spsj01100
Metabolic pathways
spsj01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K0I62_04875 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
K0I62_04875 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spsj01011
]
K0I62_04875 (mrdA)
Enzymes [BR:
spsj01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
K0I62_04875 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
spsj01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
K0I62_04875 (mrdA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QYK02305
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All DBs
Position
complement(1105002..1106885)
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AA seq
627 aa
AA seq
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MAPRKRMAMHDHAAEASLFKRRAIFTFVCVIILLSILLSNLYQLQILSFKDYETRSNDNR
IRVVPVAPSRGLIYDRHGKLLAENQPFFSLELIPEKVKDIPAALDELSQVVDISSDERES
VLESLKFHRRFKPLTIKNRLSEAEVAAFSVNQHKFPGFSVDAGLKRYYPYGSLLTHVLGY
VGRINSKDQATLQSNGQWQNYAATKDIGKQGIEKFYETLLHGKPGHLEEEVNNRGRTIRT
LKSVAPEPGQDIYLTLDLQLQKKAMELLDGRRGSIVAIDPRDGGILAMVSSPSYDPNQFV
HGISSKAYRELLNSRSRPLINRATQGQYAPASTVKPHLALLGLEEKAVTAKTRVWDPGFW
QMPGIERKYRDWKRWGHGWVDVTGAIVHSCDTYFYDLAYKTGIDNISNFMTRFGFGERTG
VDIFEESAGIMPSRDWKRIRYNQPWYNGDTISVGIGQGYWTTTPLQLANAVTILANKGER
YVPHLLKSIKDDTVKVDTPIDKMPPVELKDPNNWKIINSAMKDTAHKSRFVDAGYNAAMK
TGTAQVFSVAEDEKYDADTIDEHLRDNALIVAYAPYEAPTIVLAVVLENAGWGGVNAGPV
ARSLLDEYILRDDLPIKTAGEPNHDRP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccacgtaaacggatggctatgcatgatcatgcagccgaagcatcgctattcaaa
cgacgggcaatattcacctttgtctgcgttattattttactcagcattctccttagtaac
ctatatcaattacagatcctctccttcaaagattatgaaacgcgctcgaatgataaccgt
attcgagtggttccggtcgcccctagtcgtggtctgatatatgacaggcacggaaagcta
ttagccgagaatcagccctttttctcgctagagctgatccctgaaaaagtcaaagatatc
ccggcagccctagatgaattaagtcaggttgtcgacatcagcagtgatgagcgagaaagc
gtcctcgaatcactcaaattccaccgccgattcaaaccgctgaccattaaaaaccgactt
tctgaagcagaggtcgcagcctttagtgttaatcaacacaaattcccaggcttctccgtc
gatgcagggctcaagcgctattatccctacggtagcctattaacccatgtgctgggttat
gtcggacgaatcaacagtaaagaccaggcgacccttcaaagtaatgggcaatggcaaaat
tacgctgcaactaaagatatcggtaagcaggggattgaaaaattctatgagacattacta
cacggtaaacctggccacctcgaagaagaggtcaacaaccgtggccgaacgatccgaacc
ctaaagtccgtggcaccagagccaggtcaagatatctatttaaccttagatctgcagcta
caaaaaaaagccatggaactcttagatggacgaagaggctcgattgtagcaatagatccc
cgtgatggcgggatcttagctatggtatcgagccctagctatgatccaaaccaatttgtg
catggcatcagctcaaaggcgtatcgcgaactacttaactcgcgctcaagaccattgatt
aatcgggcaactcaaggccaatatgcgccagcctccacggtaaagcctcacctcgccttg
cttggactagaagagaaagcggttaccgctaaaacccgagtttgggatccaggattctgg
caaatgcctggaatagaaagaaaataccgtgactggaaacgctggggacatggctgggtt
gatgtaacgggcgcaattgtgcactcctgtgacacctatttctacgacttagcctacaaa
acaggtatcgacaacataagcaactttatgactcgatttggctttggagagcgaacaggt
gtcgatattttcgaagagtcggccggaatcatgccctcaagagattggaagcgcattcgc
tacaaccaaccttggtataacggcgatacgatctccgtagggattggccaaggttactgg
accacgactcctctgcaactagctaacgcagtcactattttagcgaacaaaggcgagcgc
tacgtgcctcacctccttaagtcaattaaagatgacacggttaaagtcgacaccccgata
gataaaatgcccccagtagaattaaaagatcccaataactggaagatcatcaactcggcg
atgaaagataccgcccacaaatctcgttttgttgatgcaggctataacgctgcaatgaag
acggggaccgcgcaggtgtttagtgtggctgaagatgaaaaatatgacgccgataccatc
gacgaacacctgcgagataatgcgttaatcgtcgcttatgctccctatgaagcgccgact
atcgtattagccgtggtgctggaaaacgcaggctggggtggcgtcaacgctggcccggtg
gctcgttcgctgttagatgaatatatcttacgagatgacttaccaattaagactgctggg
gagccaaaccatgaccgcccatag
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