Shewanella psychrotolerans: K0I62_05270
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Entry
K0I62_05270 CDS
T09306
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spsj03016
]
K0I62_05270
Enzymes [BR:
spsj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
K0I62_05270
Transfer RNA biogenesis [BR:
spsj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K0I62_05270
Prokaryotic type
K0I62_05270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
SLC35F
Motif
Other DBs
NCBI-ProteinID:
QYK02374
LinkDB
All DBs
Position
1188271..1189335
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AA seq
354 aa
AA seq
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MSSLHYLHGQPQSSADLRTYNSDFMVEEILPFLPTGEGEHHMIHVRKEGLNTADVARMLS
SFAGVHPKEVTFAGQKDKNAITTQWFGVRIPGKETPQWDALNSDQLTIISSSRHSKKLRT
GALAGNRFTLTLRALSSIEDVVKRIELVKQTGVPNYFGEQRFGHDGKNLIFGRQMLAGRN
VKDRNKRSMYLSAVRSHIFNEMVSSRLAMFRTQVLDGDCVMLAGSKSYFVANPWDEELVG
RLARKDIQLSAPLWGRGQALSQGKALEFEASISDQFSEDCFGLEQAGLNQERRALLLEPQ
NLSYEVEGDTLVLKFALPAGCFATSVLRELTQYEDVNDREFKARRSAQGVSSND
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacttcactatttacatggtcaacctcaatcgagtgccgatttacgtacttat
aatagcgattttatggttgaggaaatcttaccattcttgcctaccggcgaaggtgagcat
catatgatccacgtgcgcaaagagggactcaatactgcggatgtggctagaatgttgtct
agttttgctggagtacacccaaaagaggtcacctttgcgggacaaaaagataaaaatgcc
attactactcaatggtttggtgtgcgtattcctggtaaagaaacgcctcaatgggatgct
cttaatagcgatcagttgacgattattagcagtagtcgtcacagtaagaaattacgaaca
ggtgcgttggcaggtaacagatttacgctcacattaagagccctatctagtattgaagat
gttgttaagcgtatcgagcttgtaaagcaaacaggggtgcctaattattttggtgaacaa
cgctttggccatgacggaaaaaatttaattttcggtcgtcagatgcttgctggtcgtaac
gttaaagatcgcaataaacgtagcatgtacttgtcagcagttcgctcacatatttttaat
gagatggtttcctcacggttagcaatgtttcggacgcaagttcttgatggtgattgtgtc
atgctagcgggaagcaaaagctattttgtcgctaacccttgggacgaagaactagtggga
cgtttagcacggaaagatattcaattgtctgcgccattatggggtagagggcaagcgctt
tctcaagggaaagctttagagtttgaggcatccatttctgatcaatttagtgaagattgt
tttggtcttgagcaagcaggcttgaatcaagagcgtcgcgctttactgcttgagcctcag
aatttgagctatgaagtcgaaggcgataccttagtgctcaaatttgctttgcctgctggg
tgctttgcaacttcagtgctgagagagttgactcagtatgaagatgttaatgacagagag
tttaaagctaggcgatcagctcagggtgttagcagcaatgattaa
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