Shewanella psychrotolerans: K0I62_06930
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Entry
K0I62_06930 CDS
T09306
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
spsj
Shewanella psychrotolerans
Brite
KEGG Orthology (KO) [BR:
spsj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spsj03400
]
K0I62_06930
DNA repair and recombination proteins [BR:
spsj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K0I62_06930
Archaeal homologous recombinant proteins
K0I62_06930
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
nSTAND_NTPase5
GTP_EFTU
DASH_Dad3
CC_Liprin_beta
nSTAND3
ABC_tran
C17orf100
cobW
Motif
Other DBs
NCBI-ProteinID:
QYK02670
LinkDB
All DBs
Position
1566537..1569590
Genome browser
AA seq
1017 aa
AA seq
DB search
MRPLTLTMTAFGPFASEQIIDFKTLGKNPLFLINGPTGAGKTTILDAICFALYGKTTGDE
REGSQMRCDMADDERLTEVSFTFELAEHQYHIRRVPEQPRSKKSGDGYTLQKPEAQLTCF
HRDGTEVLLVAAKVSEATAQIEQLTGLDVDQFRQVMVLPQGKFRELLMADSKAREKIFSQ
LFQTHIYRKIEDKLKQQALGIKKEVEAMRNRRDGVLQGVELETDTELNDELKALAPELAS
VTAKKVETDKQVQQASQQLEQAKQLTDEFSTLAQLKLLARQLDEQQAQIDQQQQQLVAAR
NAKLLQPVYQAVEARRLELTQATEQQQKSQAYHQQSQDLLNQSLAAIEKLPELEAEQQQT
LTTAEQRRALLPQLKQLEQLKANVSDSQQQMLNAEQQGKHTKTKLAQLTGEKLAASARVP
QLKAHSQQLLTLQQISDTKHHLQLYAQWQRGCAEITQINSRLVEAKARGIQLQAHHKQCE
IHSQTVTLRWHQGQAAILAAKLSAGEPCPVCGSRDHPQLAQSEDVIPTDEEREAAQVNEQ
SALTELTSARSDYRQLIEKLKDVEQRKHELAEQLPGIDSLTQAGLETALGQLEQEFAEAT
KAQQQLVDIENSLTALQQQELQLNQQLEQEREQYRLLEKLFNETAGQLKQLQAAIPQELV
DLAALEQEIAKLEQNAAQLKLQISSLREQHTQAEQQLASAAAQLQSANDTWARAHEQHQL
AVNEFERQLQTSKFDSLSAFKVAMLTDDRIAVLEQEIKQYEQCCITNQANIAQLETKLAD
CTQPDIAAITAAKSQLETAQQNVLNQWQQLSGRMRQLEQTAEQLKSLDAQSKKLEKQYGL
VGTLSDVANGNTGNKISLQRFVLSVLLDDVLLEASHRLQLMSKGRYRLLRKEDRAKGNKA
SGLELEVEDAYTAKVRSVATLSGGESFMAALSMALGLSDVVQAYAGGIKLDTLFIDEGFG
SLDQDSLELAIRTLMDLQSAGRMVGVISHVTEMKEQIGSRIDIVKSAMGSKVELILP
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagacccttgactctgactatgaccgcttttggtccttttgctagtgagcagatcatc
gattttaaaacgcttggcaaaaatcccctgtttcttattaatggtccaacaggggcagga
aagaccaccattttagatgccatctgttttgcgctctatggtaaaaccaccggtgatgaa
cgcgaagggtcgcaaatgcgctgcgacatggctgatgatgaacgattgaccgaggtgagt
tttacatttgagttagctgagcatcaataccatattcgccgcgtgccagaacaacctaga
tccaagaaaagcggtgatggttacacgctgcaaaagcctgaagcccaattaacgtgtttt
catcgtgatggcaccgaagtcttgctggtggcggctaaggtgtcagaggcgacagcgcag
atagagcaattaaccggactagatgtcgatcaatttcgtcaggttatggtgttgccacag
gggaagtttcgtgaactgttgatggccgattccaaggcccgcgaaaaaatctttagccaa
ctatttcaaacccacatctatcgtaaaattgaggataaattaaagcagcaagccttaggt
ataaaaaaagaggtcgaggccatgcgcaatcgtcgcgatggtgtcttgcaaggggtggag
cttgaaaccgatacagagctgaacgacgagcttaaagcgcttgctcccgagcttgccagc
gttacggcaaaaaaagttgagactgataaacaagttcagcaagcgagtcagcaactggag
caggcaaagcaattaaccgatgagttttccacgctagcgcagcttaagttattggctcga
caactcgatgagcaacaagcgcagatagatcaacagcaacagcagttagtcgccgcgcgg
aatgccaagctactgcaaccggtttatcaggcggttgaggctcgaaggcttgagttaacc
caagctactgagcagcagcaaaagtcgcaagcttatcaccagcagagccaagatttgctt
aatcaaagcctagctgcgatagagaagctccctgagttagaagctgaacagcaacagaca
ttaacgaccgctgagcagcgacgcgcgctattaccgcaactcaaacagctcgaacagctt
aaagccaacgtgagtgacagtcagcagcaaatgttgaatgctgagcagcaaggtaagcat
acaaaaaccaagcttgcgcagttaacaggtgaaaaactcgcagcttcagcgcgagtgccg
cagctaaaagcccatagtcagcagttactgaccttgcagcagataagtgataccaagcat
catctgcaactttatgcacagtggcagcggggctgcgctgaaattacgcaaattaattct
cgcttggttgaggcaaaagcgcgtggaatacaactacaagcgcaccataaacagtgcgaa
atccacagtcaaacggtgacattacgctggcatcagggccaggcggccattttagcggcc
aagttatctgctggtgaaccgtgccctgtgtgcggcagtcgtgatcacccacagctggca
caaagtgaggacgtcatccctaccgatgaggagcgtgaagcagcgcaagtcaatgaacag
agtgcactgaccgaattgactagtgcgcgctccgattatcgtcagttaatcgagaaatta
aaggatgttgagcaaagaaagcatgagctggctgagcagttacctggtattgatagcctt
acgcaagctggcttagaaacagcgttagggcagctggagcaagagtttgctgaggcgacc
aaagcgcagcaacaactggtcgatattgaaaatagtctaacggcactacaacagcaagag
ttacaacttaatcagcagcttgaacaagagcgcgaacagtatcgcctgctggaaaaactg
tttaatgaaactgcgggccagcttaaacagttacaggccgcgataccgcaagagctggtg
gatttagccgcgctagagcaagagatcgctaagctggaacaaaatgcagcgcagttaaag
ttacaaatttcatctttgcgagagcaacatactcaagccgagcagcagttggctagcgcc
gcggcgcagctacaatcggcgaatgacacatgggcgagagcacatgagcaacatcagctt
gctgtaaatgaatttgagcggcagttgcaaacctctaagtttgactccttgtctgcattt
aaagttgccatgctaacagacgatcgcattgcggttttagagcaggagatcaagcaatat
gagcagtgctgtattactaaccaagcgaacatcgctcagttagagacaaaactcgctgac
tgcacacaacccgatatcgccgcaataacagcggctaagtcgcaacttgagacagcgcaa
caaaatgtgcttaatcagtggcagcaattgagtgggcgtatgcgtcagttagaacaaacc
gctgaacagctcaaaagcctagatgcgcaatcgaaaaaacttgaaaagcagtatggcctc
gttgggacactgtctgatgtcgccaatggcaataccggcaataaaattagcttacaacgt
ttcgtgctcagtgtgttgctcgatgatgtgctacttgaagccagccatagattacagcta
atgagtaaggggcgttatcgcttgttgcgtaaagaggatagggctaagggtaacaaggct
tcagggctcgaacttgaagttgaagatgcctataccgcgaaagtgcgctcagtggcgacc
ctaagtggtggagaaagctttatggcggcattgtccatggcgctaggattatcggatgtg
gtgcaagcttatgctggtggcattaaactcgataccctgtttatcgatgaaggttttggg
agcctagaccaagattcactcgaacttgcgatccgcacgctaatggatcttcagtcagct
ggacgtatggttggagtgatctctcatgttaccgagatgaaagagcagattggcagccgc
atcgatattgttaagagtgcaatgggcagtaaagtagaacttattctgccatag
DBGET
integrated database retrieval system
